Information for 18-AAGTGCCGCCAGC (Motif 17)

C G T A C G T A A C T G A C G T A T C G A G T C A G T C A C T G A G T C A G T C G T C A A T C G A G T C
Reverse Opposite:
A C T G A T G C A C G T A C T G A C T G A G T C A C T G A C T G A T G C C G T A A G T C A C G T A C G T
p-value:1e-8
log p-value:-1.868e+01
Information Content per bp:1.945
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.8 +/- 27.6bp
Average Position of motif in Background13.5 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGTGCCGCCAGC---
TACGCCCCGCCACTCTG
 A C G T C G T A C G T A A C T G A C G T A T C G A G T C A G T C A C T G A G T C A G T C G T C A A T C G A G T C A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAGTGCCGCCAGC---
-ANTGCCTGAGGCAAN
 C G T A C G T A A C T G A C G T A T C G A G T C A G T C A C T G A G T C A G T C G T C A A T C G A G T C A C G T A C G T A C G T
A C G T C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGCCGCCAGC
TTAAGTGC-------
 A C G T A C G T C G T A C G T A A C T G A C G T A T C G A G T C A G T C A C T G A G T C A G T C G T C A A T C G A G T C
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AAGTGCCGCCAGC---
----GCCGCCATCTTG
 C G T A C G T A A C T G A C G T A T C G A G T C A G T C A C T G A G T C A G T C G T C A A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

NKX3-2/MA0122.2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGCCGCCAGC
TTAAGTGGN------
 A C G T A C G T C G T A C G T A A C T G A C G T A T C G A G T C A G T C A C T G A G T C A G T C G T C A A T C G A G T C
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGCCGCCAGC
NTCAAGTGGN------
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A T C G A G T C A G T C A C T G A G T C A G T C G T C A A T C G A G T C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGCCGCCAGC
NTCAAGTGG-------
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A T C G A G T C A G T C A C T G A G T C A G T C G T C A A T C G A G T C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAGTGCCGCCAGC
-TTTCCCGCCMAV
 C G T A C G T A A C T G A C G T A T C G A G T C A G T C A C T G A G T C A G T C G T C A A T C G A G T C
A C G T C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AAGTGCCGCCAGC
--TTCCCGCCWG-
 C G T A C G T A A C T G A C G T A T C G A G T C A G T C A C T G A G T C A G T C G T C A A T C G A G T C
A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAGTGCCGCCAGC
TTRAGTGSYK-----
 A C G T A C G T C G T A C G T A A C T G A C G T A T C G A G T C A G T C A C T G A G T C A G T C G T C A A T C G A G T C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T