Information for 11-AYTACAARCCTAA (Motif 31)

G T C A A G T C A C G T G T C A G A T C C G T A C G T A C T A G A T G C A G T C G A C T C G T A G T C A
Reverse Opposite:
A C G T C G A T C G T A A C T G A T C G G A T C C G A T A C G T C A T G C A G T C G T A C T A G A C G T
p-value:1e-8
log p-value:-2.027e+01
Information Content per bp:1.739
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif30.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets43.8 +/- 21.3bp
Average Position of motif in Background51.4 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AYTACAARCCTAA
NCGTATTATAATCNTA-
 A C G T A C G T A C G T A C G T G T C A A G T C A C G T G T C A G A T C C G T A C G T A C T A G A T G C A G T C G A C T C G T A G T C A
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AYTACAARCCTAA--------
----CAAAGCTAATTAGNTTN
 G T C A A G T C A C G T G T C A G A T C C G T A C G T A C T A G A T G C A G T C G A C T C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

TBX20/MA0689.1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AYTACAARCCTAA
-CTTCACACCTA-
 G T C A A G T C A C G T G T C A G A T C C G T A C G T A C T A G A T G C A G T C G A C T C G T A G T C A
A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AYTACAARCCTAA
CCGTATTATAAACAA--
 A C G T A C G T A C G T A C G T G T C A A G T C A C G T G T C A G A T C C G T A C G T A C T A G A T G C A G T C G A C T C G T A G T C A
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AYTACAARCCTAA
----TAATCCCN-
 G T C A A G T C A C G T G T C A G A T C C G T A C G T A C T A G A T G C A G T C G A C T C G T A G T C A
A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AYTACAARCCTAA
ACATCAAAGG---
 G T C A A G T C A C G T G T C A G A T C C G T A C G T A C T A G A T G C A G T C G A C T C G T A G T C A
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AYTACAARCCTAA------
RACTACAACTCCCAGVAKGC
 A C G T G T C A A G T C A C G T G T C A G A T C C G T A C G T A C T A G A T G C A G T C G A C T C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AYTACAARCCTAA-
AAGTTCAAGGTCAGC
 A C G T G T C A A G T C A C G T G T C A G A T C C G T A C G T A C T A G A T G C A G T C G A C T C G T A G T C A A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

LIN54/MA0619.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AYTACAARCCTAA
NATTCAAAT-----
 A C G T G T C A A G T C A C G T G T C A G A T C C G T A C G T A C T A G A T G C A G T C G A C T C G T A G T C A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AYTACAARCCTAA---
--TCGAAACCGAAACT
 G T C A A G T C A C G T G T C A G A T C C G T A C G T A C T A G A T G C A G T C G A C T C G T A G T C A A C G T A C G T A C G T
A C G T A C G T G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T