Information for 1-CGCCCTTTGA (Motif 2)

T G A C T C A G A T G C A G T C G A T C A C G T A C G T A C G T A C T G C T G A
Reverse Opposite:
G A C T T G A C T G C A T G C A C G T A C T A G C T A G A T C G A G T C A C T G
p-value:1e-13
log p-value:-3.119e+01
Information Content per bp:1.676
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif7.59%
Number of Background Sequences with motif1117.2
Percentage of Background Sequences with motif2.32%
Average Position of motif in Targets54.0 +/- 26.8bp
Average Position of motif in Background48.0 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGCCCTTTGA---
-TNCCTTTGATGT
 T G A C T C A G A T G C A G T C G A T C A C G T A C G T A C G T A C T G C T G A A C G T A C G T A C G T
A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CGCCCTTTGA---
---CCTTTGATGT
 T G A C T C A G A T G C A G T C G A T C A C G T A C G T A C G T A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CGCCCTTTGA---
---CCTTTGAWGT
 T G A C T C A G A T G C A G T C G A T C A C G T A C G T A C G T A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CGCCCTTTGA
GTCCGCCATTA--
 A C G T A C G T A C G T T G A C T C A G A T G C A G T C G A T C A C G T A C G T A C G T A C T G C T G A
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CGCCCTTTGA------
AATCCCTTTGATCTATC
 A C G T T G A C T C A G A T G C A G T C G A T C A C G T A C G T A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGCCCTTTGA-----
-TNCCTTTGATCTTN
 T G A C T C A G A T G C A G T C G A T C A C G T A C G T A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGCCCTTTGA------
ATTTCCTTTGATCTATA
 A C G T T G A C T C A G A T G C A G T C G A T C A C G T A C G T A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGCCCTTTGA------
NNTTCCTTTGATCTANA
 A C G T T G A C T C A G A T G C A G T C G A T C A C G T A C G T A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGCCCTTTGA------
NNTTCCTTTGATCTNNA
 A C G T T G A C T C A G A T G C A G T C G A T C A C G T A C G T A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CGCCCTTTGA
ANCGCGCGCCCTTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C A G A T G C A G T C G A T C A C G T A C G T A C G T A C T G C T G A
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T