p-value: | 1e-10 |
log p-value: | -2.513e+01 |
Information Content per bp: | 1.872 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.81% |
Number of Background Sequences with motif | 3.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 30.8 +/- 22.2bp |
Average Position of motif in Background | 40.6 +/- 38.1bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0122.1_Obox2/Jaspar
Match Rank: | 1 |
Score: | 0.72 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---YGGGGTTTAMMTM- TGAGGGGGATTAACTAT |
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PH0124.1_Obox5_1/Jaspar
Match Rank: | 2 |
Score: | 0.72 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --YGGGGTTTAMMTM-- TAGAGGGATTAAATTTC |
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PH0123.1_Obox3/Jaspar
Match Rank: | 3 |
Score: | 0.71 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---YGGGGTTTAMMTM- TGAGGGGGATTAACTAT |
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PH0121.1_Obox1/Jaspar
Match Rank: | 4 |
Score: | 0.70 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---YGGGGTTTAMMTM- TTAAGGGGATTAACTAC |
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PH0125.1_Obox5_2/Jaspar
Match Rank: | 5 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --YGGGGTTTAMMTM-- NANAGGGATTAATTATN |
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Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
Match Rank: | 6 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | YGGGGTTTAMMTM -NGGGATTA---- |
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PH0137.1_Pitx1/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---YGGGGTTTAMMTM- TTAGAGGGATTAACAAT |
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PH0139.1_Pitx3/Jaspar
Match Rank: | 8 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -YGGGGTTTAMMTM-- AGGGGGATTAGCTGCC |
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PH0129.1_Otx1/Jaspar
Match Rank: | 9 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --YGGGGTTTAMMTM-- AGAGGGGATTAATTTAT |
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PH0015.1_Crx/Jaspar
Match Rank: | 10 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---YGGGGTTTAMMTM CGTTGGGGATTAGCCT |
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