Information for 10-TTTTRAAAAA (Motif 9)

A G C T A G C T C A G T C G A T C T G A T C G A T C G A C T G A T G C A G C T A
Reverse Opposite:
C G A T A C G T A G C T A G C T A G C T G A C T G C T A G T C A C T G A T C G A
p-value:1e-6
log p-value:-1.570e+01
Information Content per bp:1.610
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif11.83%
Number of Background Sequences with motif3281.0
Percentage of Background Sequences with motif6.84%
Average Position of motif in Targets46.6 +/- 26.2bp
Average Position of motif in Background49.8 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TTTTRAAAAA------
GTTAAAAAAAAAAATTA
 A C G T A G C T A G C T C A G T C G A T C T G A T C G A T C G A C T G A T G C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTTTRAAAAA--
CAATTGCAAAAATAT
 A C G T A C G T A C G T A G C T A G C T C A G T C G A T C T G A T C G A T C G A C T G A T G C A G C T A A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTTRAAAAA-
TTTCTNAGAAAN
 A C G T A G C T A G C T C A G T C G A T C T G A T C G A T C G A C T G A T G C A G C T A A C G T
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTTTRAAAAA------
GTTCAAAAAAAAAATTC
 A C G T A G C T A G C T C A G T C G A T C T G A T C G A T C G A C T G A T G C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTTTRAAAAA--
TACTGGAAAAAAAA
 A C G T A C G T A G C T A G C T C A G T C G A T C T G A T C G A T C G A C T G A T G C A G C T A A C G T A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTTTRAAAAA--
AAATAAGAAAAAAC
 A C G T A C G T A G C T A G C T C A G T C G A T C T G A T C G A T C G A C T G A T G C A G C T A A C G T A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

Stat4/MA0518.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTTRAAAAA---
TTTCCAGGAAATGG
 A C G T A G C T A G C T C A G T C G A T C T G A T C G A T C G A C T G A T G C A G C T A A C G T A C G T A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTTTRAAAAA-
-TTTGAAACCG
 A G C T A G C T C A G T C G A T C T G A T C G A T C G A C T G A T G C A G C T A A C G T
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTTTRAAAAA-
TTCTTGGAAAN
 A G C T A G C T C A G T C G A T C T G A T C G A T C G A C T G A T G C A G C T A A C G T
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

STAT1/MA0137.3/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTTTRAAAAA
TTTCCAGGAAA
 A C G T A G C T A G C T C A G T C G A T C T G A T C G A T C G A C T G A T G C A G C T A
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A