Information for 9-GGCCTCCCCTGCT (Motif 8)

C T A G A C T G A G T C T A G C A C G T A G T C A G T C A G T C A G T C A C G T A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A A C T G C T A G A C T G A C T G C G T A A T C G A C T G A G T C A G T C
p-value:1e-8
log p-value:-1.969e+01
Information Content per bp:1.943
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.4 +/- 16.7bp
Average Position of motif in Background37.2 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GGCCTCCCCTGCT---
----CCCCCTGCTGTG
 C T A G A C T G A G T C T A G C A C G T A G T C A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0110.1_Bcl6b_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGCCTCCCCTGCT-
ATCCCCGCCCCTAAAA
 A C G T A C G T C T A G A C T G A G T C T A G C A C G T A G T C A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

ZEB1/MA0103.2/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGCCTCCCCTGCT
--CCTCACCTG--
 C T A G A C T G A G T C T A G C A C G T A G T C A G T C A G T C A G T C A C G T A C T G A G T C A C G T
A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGCCTCCCCTGCT
----TCCCCA---
 C T A G A C T G A G T C T A G C A C G T A G T C A G T C A G T C A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGCCTCCCCTGCT------
----TCNCCTGCTGNGNNN
 C T A G A C T G A G T C T A G C A C G T A G T C A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGCCTCCCCTGCT----
--GGCCYCCTGCTGDGH
 C T A G A C T G A G T C T A G C A C G T A G T C A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGCCTCCCCTGCT--
-TCCGCCCCCGCATT
 C T A G A C T G A G T C T A G C A C G T A G T C A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGCCTCCCCTGCT------
----TNTCCTGCTGTGNNG
 C T A G A C T G A G T C T A G C A C G T A G T C A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

NFKB1/MA0105.4/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTCCCCTGCT
AGGGGATTCCCCT---
 A C G T A C G T A C G T C T A G A C T G A G T C T A G C A C G T A G T C A G T C A G T C A G T C A C G T A C T G A G T C A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGCCTCCCCTGCT
CCCCCGCCCCCGCC
 A C G T C T A G A C T G A G T C T A G C A C G T A G T C A G T C A G T C A G T C A C G T A C T G A G T C A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C