Information for 8-AARGMYGACTGYA (Motif 6)

C G T A C G T A C T A G A C T G G T C A A G C T A C T G G T C A A G T C A C G T A C T G A G C T C G T A
Reverse Opposite:
A C G T T C G A A G T C C G T A C T A G A C G T A G T C C T G A A C G T A G T C A G T C A C G T A C G T
p-value:1e-10
log p-value:-2.446e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 24.8bp
Average Position of motif in Background67.0 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AARGMYGACTGYA-----
-AATCGCACTGCATTCCG
 C G T A C G T A C T A G A C T G G T C A A G C T A C T G G T C A A G T C A C G T A C T G A G C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Mafb/MA0117.2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AARGMYGACTGYA
AAAATGCTGACT---
 A C G T A C G T C G T A C G T A C T A G A C T G G T C A A G C T A C T G G T C A A G T C A C G T A C T G A G C T C G T A
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AARGMYGACTGYA
TAAAAATGCTGACTT--
 A C G T A C G T A C G T A C G T C G T A C G T A C T A G A C T G G T C A A G C T A C T G G T C A A G T C A C G T A C T G A G C T C G T A
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AARGMYGACTGYA
GTCATGCHTGRCTGS-
 A C G T A C G T A C G T C G T A C G T A C T A G A C T G G T C A A G C T A C T G G T C A A G T C A C G T A C T G A G C T C G T A
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AARGMYGACTGYA
--VBSYGTCTGG-
 C G T A C G T A C T A G A C T G G T C A A G C T A C T G G T C A A G T C A C G T A C T G A G C T C G T A
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AARGMYGACTGYA
GCAAAACATTACTA--
 A C G T A C G T A C G T C G T A C G T A C T A G A C T G G T C A A G C T A C T G G T C A A G T C A C G T A C T G A G C T C G T A
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AARGMYGACTGYA
---CATGAC----
 C G T A C G T A C T A G A C T G G T C A A G C T A C T G G T C A A G T C A C G T A C T G A G C T C G T A
A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AARGMYGACTGYA
AAAWWTGCTGACWWD-
 A C G T A C G T A C G T C G T A C G T A C T A G A C T G G T C A A G C T A C T G G T C A A G T C A C G T A C T G A G C T C G T A
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AARGMYGACTGYA--
NNNNTGAGCACTGTNNG
 A C G T A C G T C G T A C G T A C T A G A C T G G T C A A G C T A C T G G T C A A G T C A C G T A C T G A G C T C G T A A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AARGMYGACTGYA
AATTTGCTGAC----
 A C G T A C G T C G T A C G T A C T A G A C T G G T C A A G C T A C T G G T C A A G T C A C G T A C T G A G C T C G T A
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T