Information for 6-HCTADTGAACAGC (Motif 4)

G T A C A G T C C G A T G T C A C A T G C G A T A C T G C G T A C G T A A T G C G T C A A C T G G T A C
Reverse Opposite:
A C T G A G T C A C G T A T C G A C G T A C G T A G T C G C T A G A T C A C G T C G T A A C T G C A T G
p-value:1e-12
log p-value:-2.893e+01
Information Content per bp:1.800
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif29.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets51.9 +/- 23.8bp
Average Position of motif in Background51.1 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:HCTADTGAACAGC-
----TGGAACAGMA
 G T A C A G T C C G A T G T C A C A T G C G A T A C T G C G T A C G T A A T G C G T C A A C T G G T A C A C G T
A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---HCTADTGAACAGC-
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T G T A C A G T C C G A T G T C A C A T G C G A T A C T G C G T A C G T A A T G C G T C A A C T G G T A C A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:HCTADTGAACAGC
--CCAGGAACAG-
 G T A C A G T C C G A T G T C A C A T G C G A T A C T G C G T A C G T A A T G C G T C A A C T G G T A C
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.60
Offset:7
Orientation:forward strand
Alignment:HCTADTGAACAGC--
-------AACAGCTG
 G T A C A G T C C G A T G T C A C A T G C G A T A C T G C G T A C G T A A T G C G T C A A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:HCTADTGAACAGC--
-----NHAACBGYYV
 G T A C A G T C C G A T G T C A C A T G C G A T A C T G C G T A C G T A A T G C G T C A A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:HCTADTGAACAGC
-------CACAGN
 G T A C A G T C C G A T G T C A C A T G C G A T A C T G C G T A C G T A A T G C G T C A A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

MSC/MA0665.1/Jaspar

Match Rank:7
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:HCTADTGAACAGC----
-------AACAGCTGTT
 G T A C A G T C C G A T G T C A C A T G C G A T A C T G C G T A C G T A A T G C G T C A A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:8
Score:0.58
Offset:6
Orientation:forward strand
Alignment:HCTADTGAACAGC---
------BAACAGCTGT
 G T A C A G T C C G A T G T C A C A T G C G A T A C T G C G T A C G T A A T G C G T C A A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:9
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:HCTADTGAACAGC-
------YAACBGCC
 G T A C A G T C C G A T G T C A C A T G C G A T A C T G C G T A C G T A A T G C G T C A A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:HCTADTGAACAGC---
------NAACAGCTGG
 G T A C A G T C C G A T G T C A C A T G C G A T A C T G C G T A C G T A A T G C G T C A A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G