Information for 6-TGAGAAATTC (Motif 7)

A C G T A C T G C G T A C T A G C G T A C G T A T C G A G C A T A G C T G T A C
Reverse Opposite:
A C T G C T G A C G T A A G C T A C G T A C G T A G T C G C A T A G T C C G T A
p-value:1e-8
log p-value:-1.942e+01
Information Content per bp:1.847
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif156.5
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets54.4 +/- 32.6bp
Average Position of motif in Background47.8 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGAGAAATTC
CSTGGGAAAD--
 A C G T A C G T A C G T A C T G C G T A C T A G C G T A C G T A T C G A G C A T A G C T G T A C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGAGAAATTC-
-GGGAATTTCC
 A C G T A C T G C G T A C T A G C G T A C G T A T C G A G C A T A G C T G T A C A C G T
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------TGAGAAATTC
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T A G C G T A C G T A T C G A G C A T A G C T G T A C
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGAGAAATTC--
--GGAAATTCCC
 A C G T A C T G C G T A C T A G C G T A C G T A T C G A G C A T A G C T G T A C A C G T A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGAGAAATTC
AGGTGTGAAA---
 A C G T A C G T A C G T A C G T A C T G C G T A C T A G C G T A C G T A T C G A G C A T A G C T G T A C
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGAGAAATTC
AAGGTGTGAAAAT-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T A G C G T A C G T A T C G A G C A T A G C T G T A C
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGAGAAATTC
AAGGTGTKAA----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T A G C G T A C G T A T C G A G C A T A G C T G T A C
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGAGAAATTC---
-GGGAAATCCCCN
 A C G T A C T G C G T A C T A G C G T A C G T A T C G A G C A T A G C T G T A C A C G T A C G T A C G T
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGAGAAATTC
GAAAGTGAAAGT-
 A C G T A C G T A C G T A C G T A C T G C G T A C T A G C G T A C G T A T C G A G C A T A G C T G T A C
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGAGAAATTC
AGGTGTGAAM---
 A C G T A C G T A C G T A C G T A C T G C G T A C T A G C G T A C G T A T C G A G C A T A G C T G T A C
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T