Information for 12-WTGTCYTTTGKKG (Motif 13)

C G T A A C G T A C T G A C G T A G T C A G C T A G C T A C G T A C G T A C T G A C G T A C T G A C T G
Reverse Opposite:
A G T C G T A C G T C A A G T C C G T A C G T A C T G A C T G A A C T G C G T A A G T C C G T A G C A T
p-value:1e-7
log p-value:-1.809e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.8 +/- 19.4bp
Average Position of motif in Background60.2 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:WTGTCYTTTGKKG
CTGACCTTTG---
 C G T A A C G T A C T G A C G T A G T C A G C T A G C T A C G T A C G T A C T G A C G T A C T G A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:WTGTCYTTTGKKG
----CCWTTGTY-
 C G T A A C G T A C T G A C G T A G T C A G C T A G C T A C G T A C G T A C T G A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:WTGTCYTTTGKKG----
TNNTCCTTTGTTCTNNT
 C G T A A C G T A C T G A C G T A G T C A G C T A G C T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:WTGTCYTTTGKKG----
NNNTCCTTTGTTCTNNN
 C G T A A C G T A C T G A C G T A G T C A G C T A G C T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:WTGTCYTTTGKKG
----CCTTTGTT-
 C G T A A C G T A C T G A C G T A G T C A G C T A G C T A C G T A C G T A C T G A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---WTGTCYTTTGKKG
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C A G C T A G C T A C G T A C G T A C T G A C G T A C T G A C T G
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---WTGTCYTTTGKKG
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C A G C T A G C T A C G T A C G T A C T G A C G T A C T G A C T G
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:WTGTCYTTTGKKG
TTGACTTTT----
 C G T A A C G T A C T G A C G T A G T C A G C T A G C T A C G T A C G T A C T G A C G T A C T G A C T G
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:WTGTCYTTTGKKG-
----CCTTTGTTTT
 C G T A A C G T A C T G A C G T A G T C A G C T A G C T A C G T A C G T A C T G A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:WTGTCYTTTGKKG----
NNTTCCTTTGATCTNNA
 C G T A A C G T A C T G A C G T A G T C A G C T A G C T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A