Information for 20-TGGAGMWSCTGRG (Motif 47)

A C G T A C T G A T C G C G T A A C T G G T A C C G A T A T C G A G T C A C G T A C T G C T G A A C T G
Reverse Opposite:
G T A C A G C T A G T C C G T A A C T G A T G C C G T A A C T G A G T C C G A T A T G C A G T C C G T A
p-value:1e-5
log p-value:-1.229e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif26.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets58.9 +/- 26.2bp
Average Position of motif in Background45.9 +/- 37.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGGAGMWSCTGRG
---CGCAGCTGCG
 A C G T A C T G A T C G C G T A A C T G G T A C C G A T A T C G A G T C A C G T A C T G C T G A A C T G
A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGMWSCTGRG---
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C T G A T C G C G T A A C T G G T A C C G A T A T C G A G T C A C G T A C T G C T G A A C T G A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGGAGMWSCTGRG----
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T A C T G A T C G C G T A A C T G G T A C C G A T A T C G A G T C A C G T A C T G C T G A A C T G A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGGAGMWSCTGRG
--CAGCAGCTGN-
 A C G T A C T G A T C G C G T A A C T G G T A C C G A T A T C G A G T C A C G T A C T G C T G A A C T G
A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGGAGMWSCTGRG
-NNAGCAGCTGCT
 A C G T A C T G A T C G C G T A A C T G G T A C C G A T A T C G A G T C A C G T A C T G C T G A A C T G
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGGAGMWSCTGRG--
---NVCAGCTGBBNN
 A C G T A C T G A T C G C G T A A C T G G T A C C G A T A T C G A G T C A C G T A C T G C T G A A C T G A C G T A C G T
A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGGAGMWSCTGRG
---ANCAGCTG--
 A C G T A C T G A T C G C G T A A C T G G T A C C G A T A T C G A G T C A C G T A C T G C T G A A C T G
A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TGGAGMWSCTGRG
GRTGMTRGAGCC------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G C G T A A C T G G T A C C G A T A T C G A G T C A C G T A C T G C T G A A C T G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGMWSCTGRG
GTGGAT--------
 A C G T A C G T A C T G A T C G C G T A A C T G G T A C C G A T A T C G A G T C A C G T A C T G C T G A A C T G
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGGAGMWSCTGRG
GGGAGGACNG---
 A C G T A C T G A T C G C G T A A C T G G T A C C G A T A T C G A G T C A C G T A C T G C T G A A C T G
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T