Information for 25-GCCTGACATATTCCCT (Motif 45)

A C T G A G T C A G T C A C G T A C T G G T C A A G T C C T G A C G A T C G T A A G C T A C G T A G T C A G T C A G T C A C G T
Reverse Opposite:
C G T A C T A G C T A G A C T G C G T A C T G A A C G T C G T A A G C T C T A G A C G T A G T C C G T A A C T G A C T G A G T C
p-value:1e-6
log p-value:-1.425e+01
Information Content per bp:1.908
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 19.1bp
Average Position of motif in Background47.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCCTGACATATTCCCT-
---TGACCTTTGCCCTA
 A C T G A G T C A G T C A C G T A C T G G T C A A G T C C T G A C G A T C G T A A G C T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

TEAD4/MA0809.1/Jaspar

Match Rank:2
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GCCTGACATATTCCCT
------CACATTCCAT
 A C T G A G T C A G T C A C G T A C T G G T C A A G T C C T G A C G A T C G T A A G C T A C G T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

TEAD1/MA0090.2/Jaspar

Match Rank:3
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GCCTGACATATTCCCT
------CACATTCCAT
 A C T G A G T C A G T C A C G T A C T G G T C A A G T C C T G A C G A T C G T A A G C T A C G T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCCTGACATATTCCCT
ACCGTGACTAATTNN--
 A C G T A C T G A G T C A G T C A C G T A C T G G T C A A G T C C T G A C G A T C G T A A G C T A C G T A G T C A G T C A G T C A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGACATATTCCCT--
NTGACTCANTTTTTCCANTN
 A C G T A C G T A C T G A G T C A G T C A C G T A C T G G T C A A G T C C T G A C G A T C G T A A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GCCTGACATATTCCCT-
-------GCATTCCAGN
 A C T G A G T C A G T C A C G T A C T G G T C A A G T C C T G A C G A T C G T A A G C T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GCCTGACATATTCCCT-
-------RCATTCCWGG
 A C T G A G T C A G T C A C G T A C T G G T C A A G T C C T G A C G A T C G T A A G C T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.51
Offset:9
Orientation:forward strand
Alignment:GCCTGACATATTCCCT---
---------ATTTCCTGTN
 A C T G A G T C A G T C A C G T A C T G G T C A A G T C C T G A C G A T C G T A A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCCTGACATATTCCCT--
---TGACCTTTGCCCTAN
 A C T G A G T C A G T C A C G T A C T G G T C A A G T C C T G A C G A T C G T A A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

NEUROG2/MA0669.1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GCCTGACATATTCCCT
----AACATATGTC--
 A C T G A G T C A G T C A C G T A C T G G T C A A G T C C T G A C G A T C G T A A G C T A C G T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T A C G T