Information for 3-CAGCATCGTCCTC (Motif 4)

A G T C C G T A A C T G A G T C G T C A C A G T G T A C A C T G A G C T A G T C A G T C A C G T A T G C
Reverse Opposite:
A T C G G T C A A C T G A C T G C T G A T G A C C A T G G C T A A C G T A C T G G T A C C G A T A C T G
p-value:1e-12
log p-value:-2.802e+01
Information Content per bp:1.771
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif44.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets39.6 +/- 25.1bp
Average Position of motif in Background50.9 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CAGCATCGTCCTC--
---CAACGTCCGCGG
 A G T C C G T A A C T G A G T C G T C A C A G T G T A C A C T G A G C T A G T C A G T C A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGCATCGTCCTC
CAGCTGTTTCCT-
 A G T C C G T A A C T G A G T C G T C A C A G T G T A C A C T G A G C T A G T C A G T C A C G T A T G C
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAGCATCGTCCTC
NGTCAGCANTTT----
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C G T C A C A G T G T A C A C T G A G C T A G T C A G T C A C G T A T G C
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAGCATCGTCCTC
GTCAGCANNTN----
 A C G T A C G T A G T C C G T A A C T G A G T C G T C A C A G T G T A C A C T G A G C T A G T C A G T C A C G T A T G C
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CAGCATCGTCCTC
ADGGYAGYAGCATCT--
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C G T C A C A G T G T A C A C T G A G C T A G T C A G T C A C G T A T G C
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCATCGTCCTC
TGAGTCAGCA--------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C G T C A C A G T G T A C A C T G A G C T A G T C A G T C A C G T A T G C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CAGCATCGTCCTC--
-----CNGTCCTCCC
 A G T C C G T A A C T G A G T C G T C A C A G T G T A C A C T G A G C T A G T C A G T C A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGCATCGTCCTC
CAGCC--------
 A G T C C G T A A C T G A G T C G T C A C A G T G T A C A C T G A G C T A G T C A G T C A C G T A T G C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CAGCATCGTCCTC
CTGAGTCAGCAATTT----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C G T C A C A G T G T A C A C T G A G C T A G T C A G T C A C G T A T G C
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T A C G T A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGCATCGTCCTC-
ATGCCACGTCATCA
 A G T C C G T A A C T G A G T C G T C A C A G T G T A C A C T G A G C T A G T C A G T C A C G T A T G C A C G T
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A