Information for 8-AGARTGWACC (Motif 31)

C T G A C T A G C G T A C T A G C A G T C T A G C G A T T G C A G A T C A T G C
Reverse Opposite:
A T C G C T A G A C G T C G T A G A T C G T C A A G T C C G A T A G T C A G C T
p-value:1e-8
log p-value:-1.858e+01
Information Content per bp:1.720
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif157.3
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets55.1 +/- 26.7bp
Average Position of motif in Background49.1 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGARTGWACC---
--AATGTATCAAT
 C T G A C T A G C G T A C T A G C A G T C T A G C G A T T G C A G A T C A T G C A C G T A C G T A C G T
A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGARTGWACC
NTGGAATGTG--
 A C G T A C G T C T G A C T A G C G T A C T A G C A G T C T A G C G A T T G C A G A T C A T G C
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGARTGWACC
NTGGAATGTN--
 A C G T A C G T C T G A C T A G C G T A C T A G C A G T C T A G C G A T T G C A G A T C A T G C
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGARTGWACC----
GCTGGGGGGTACCCCTT
 A C G T A C G T A C G T C T G A C T A G C G T A C T A G C A G T C T A G C G A T T G C A G A T C A T G C A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

POL002.1_INR/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGARTGWACC
NNNANTGA---
 A C G T C T G A C T A G C G T A C T A G C A G T C T A G C G A T T G C A G A T C A T G C
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:6
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AGARTGWACC-
GGGAACACAATGTTCCC
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G C G T A C T A G C A G T C T A G C G A T T G C A G A T C A T G C A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGARTGWACC--
GGAGAAAGGTGCGA
 A C G T A C G T C T G A C T A G C G T A C T A G C A G T C T A G C G A T T G C A G A T C A T G C A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

TEAD3/MA0808.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGARTGWACC
TGGAATGT---
 A C G T C T G A C T A G C G T A C T A G C A G T C T A G C G A T T G C A G A T C A T G C
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGARTGWACC--
GHTACAWTGTADCHR
 A C G T A C G T A C G T C T G A C T A G C G T A C T A G C A G T C T A G C G A T T G C A G A T C A T G C A C G T A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------AGARTGWACC--
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G C G T A C T A G C A G T C T A G C G A T T G C A G A T C A T G C A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G