Information for 15-AGTGTCACAGGAA (Motif 26)

C G T A A C T G G A C T A C T G C G A T A T G C T G C A A G T C G T C A A C T G C A T G G T C A C G T A
Reverse Opposite:
G A C T A C G T G T A C G T A C A C G T A C T G A C G T A T C G G C T A A G T C C T G A A G T C G C A T
p-value:1e-8
log p-value:-1.979e+01
Information Content per bp:1.773
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.2 +/- 22.8bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:AGTGTCACAGGAA
---GTCACATGAY
 C G T A A C T G G A C T A C T G C G A T A T G C T G C A A G T C G T C A A C T G C A T G G T C A C G T A
A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGTGTCACAGGAA
AGGTGTGAAM----
 A C G T C G T A A C T G G A C T A C T G C G A T A T G C T G C A A G T C G T C A A C T G C A T G G T C A C G T A
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGTGTCACAGGAA
-NTGTCAN-----
 C G T A A C T G G A C T A C T G C G A T A T G C T G C A A G T C G T C A A C T G C A T G G T C A C G T A
A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGTGTCACAGGAA
CCTGTCAA-----
 C G T A A C T G G A C T A C T G C G A T A T G C T G C A A G T C G T C A A C T G C A T G G T C A C G T A
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGTGTCACAGGAA
--TGTCANYT---
 C G T A A C T G G A C T A C T G C G A T A T G C T G C A A G T C G T C A A C T G C A T G G T C A C G T A
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGTGTCACAGGAA
--AGTCACGC---
 C G T A A C T G G A C T A C T G C G A T A T G C T G C A A G T C G T C A A C T G C A T G G T C A C G T A
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGTGTCACAGGAA
AGGTGTCA------
 A C G T C G T A A C T G G A C T A C T G C G A T A T G C T G C A A G T C G T C A A C T G C A T G G T C A C G T A
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGTGTCACAGGAA
--GGTCACATGAC
 C G T A A C T G G A C T A C T G C G A T A T G C T G C A A G T C G T C A A C T G C A T G G T C A C G T A
A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AGTGTCACAGGAA
TNNNNGGTGTCATNTNT-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G G A C T A C T G C G A T A T G C T G C A A G T C G T C A A C T G C A T G G T C A C G T A
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGTGTCACAGGAA
AAGGTGTGAAA----
 A C G T A C G T C G T A A C T G G A C T A C T G C G A T A T G C T G C A A G T C G T C A A C T G C A T G G T C A C G T A
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T