Information for 12-GCTGGCTGCTCCT (Motif 22)

A C T G A G T C A C G T A C T G A C T G A G T C C G A T A C T G A G T C C G A T A T G C A G T C A C G T
Reverse Opposite:
C G T A A C T G A T C G C G T A A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C T G G T A C
p-value:1e-9
log p-value:-2.095e+01
Information Content per bp:1.907
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.9 +/- 25.5bp
Average Position of motif in Background45.9 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCTGGCTGCTCCT
---AGCAGCTGCT
 A C T G A G T C A C G T A C T G A C T G A G T C C G A T A C T G A G T C C G A T A T G C A G T C A C G T
A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCTGGCTGCTCCT-----
---AGATGCTRCTRCCHT
 A C T G A G T C A C G T A C T G A C T G A G T C C G A T A C T G A G T C C G A T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCTGGCTGCTCCT
-TTGGCA------
 A C T G A G T C A C G T A C T G A C T G A G T C C G A T A C T G A G T C C G A T A T G C A G T C A C G T
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCTGGCTGCTCCT--
---AGCAGCTGCTNN
 A C T G A G T C A C G T A C T G A C T G A G T C C G A T A C T G A G T C C G A T A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCTGGCTGCTCCT
-TWGTCTGV----
 A C T G A G T C A C G T A C T G A C T G A G T C C G A T A C T G A G T C C G A T A T G C A G T C A C G T
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCTGGCTGCTCCT
GGTCTGGCAT-----
 A C G T A C G T A C T G A G T C A C G T A C T G A C T G A G T C C G A T A C T G A G T C C G A T A T G C A G T C A C G T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTGGCTGCTCCT
CGTGGGTGGTCC-
 A C T G A G T C A C G T A C T G A C T G A G T C C G A T A C T G A G T C C G A T A T G C A G T C A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCTGGCTGCTCCT
---CNGTCCTCCC
 A C T G A G T C A C G T A C T G A C T G A G T C C G A T A C T G A G T C C G A T A T G C A G T C A C G T
A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCTGGCTGCTCCT
NTTGGCANN----
 A C T G A G T C A C G T A C T G A C T G A G T C C G A T A C T G A G T C C G A T A T G C A G T C A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCTGGCTGCTCCT
-CTGTCTGG----
 A C T G A G T C A C G T A C T G A C T G A G T C C G A T A C T G A G T C C G A T A T G C A G T C A C G T
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T