Information for 6-AGGCCAAGCA (Motif 21)

G C T A C T A G T C A G T A G C G A T C G C T A C G T A A T C G T A G C T G C A
Reverse Opposite:
A C G T A T C G T A G C G C A T C A G T C T A G A T C G A G T C G A T C C G A T
p-value:1e-9
log p-value:-2.096e+01
Information Content per bp:1.481
Number of Target Sequences with motif134.0
Percentage of Target Sequences with motif18.98%
Number of Background Sequences with motif4987.4
Percentage of Background Sequences with motif11.16%
Average Position of motif in Targets50.9 +/- 27.0bp
Average Position of motif in Background50.6 +/- 38.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGGCCAAGCA
AGGCCTAG--
 G C T A C T A G T C A G T A G C G A T C G C T A C G T A A T C G T A G C T G C A
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGGCCAAGCA
AGGCCTNG--
 G C T A C T A G T C A G T A G C G A T C G C T A C G T A A T C G T A G C T G C A
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCAAGCA---
CAGGCCNNGGCCNN
 A C G T G C T A C T A G T C A G T A G C G A T C G C T A C G T A A T C G T A G C T G C A A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGGCCAAGCA
GAGSCCGAGC-
 A C G T G C T A C T A G T C A G T A G C G A T C G C T A C G T A A T C G T A G C T G C A
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGGCCAAGCA
-TGCCAA---
 G C T A C T A G T C A G T A G C G A T C G C T A C G T A A T C G T A G C T G C A
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGGCCAAGCA
CGTGCCAAG--
 A C G T G C T A C T A G T C A G T A G C G A T C G C T A C G T A A T C G T A G C T G C A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGGCCAAGCA
ACTAGCCAATCA
 A C G T A C G T G C T A C T A G T C A G T A G C G A T C G C T A C G T A A T C G T A G C T G C A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGGCCAAGCA
CAAGGHCANV--
 A C G T A C G T G C T A C T A G T C A G T A G C G A T C G C T A C G T A A T C G T A G C T G C A
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGGCCAAGCA---
ACTATGCCAACCTACC
 A C G T A C G T A C G T G C T A C T A G T C A G T A G C G A T C G C T A C G T A A T C G T A G C T G C A A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGGCCAAGCA
ATGCCAACC-
 G C T A C T A G T C A G T A G C G A T C G C T A C G T A A T C G T A G C T G C A
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T