Information for 2-TGTTCAGAGCACWCTG (Motif 2)

A C G T A C T G G A C T A C G T A G T C G T C A A C T G C T G A C T A G A G T C C G T A G T A C C G T A A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A C T A G C G A T A C T G C G A T A C T G A G T C A G C T G T A C A C G T A C T G G T C A C T G A A G T C G T C A
p-value:1e-13
log p-value:-3.150e+01
Information Content per bp:1.795
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.2 +/- 21.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGTTCAGAGCACWCTG---
----VAGRACAKNCTGTBC
 A C G T A C T G G A C T A C G T A G T C G T C A A C T G C T G A C T A G A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGTTCAGAGCACWCTG---
----VAGRACAKWCTGTYC
 A C G T A C T G G A C T A C G T A G T C G T C A A C T G C T G A C T A G A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TGTTCAGAGCACWCTG---
----AAGAACATWHTGTTC
 A C G T A C T G G A C T A C G T A G T C G T C A A C T G C T G A C T A G A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TGTTCAGAGCACWCTG----
----NAGAACAGNCTGTNCT
 A C G T A C T G G A C T A C G T A G T C G T C A A C T G C T G A C T A G A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TGTTCAGAGCACWCTG
CTGTTCCTGG-------
 A C G T A C G T A C T G G A C T A C G T A G T C G T C A A C T G C T G A C T A G A G T C C G T A G T A C C G T A A G T C A C G T A C T G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:6
Score:0.49
Offset:4
Orientation:forward strand
Alignment:TGTTCAGAGCACWCTG
----GCGACCACACTG
 A C G T A C T G G A C T A C G T A G T C G T C A A C T G C T G A C T A G A G T C C G T A G T A C C G T A A G T C A C G T A C T G
A C G T A C G T A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.48
Offset:4
Orientation:forward strand
Alignment:TGTTCAGAGCACWCTG----
----NAGNACANNNTGTNCT
 A C G T A C T G G A C T A C G T A G T C G T C A A C T G C T G A C T A G A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.48
Offset:0
Orientation:forward strand
Alignment:TGTTCAGAGCACWCTG-
CGAACAGTGCTCACTAT
 A C G T A C T G G A C T A C G T A G T C G T C A A C T G C T G A C T A G A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.47
Offset:4
Orientation:forward strand
Alignment:TGTTCAGAGCACWCTG---
----NAGGTCACNNTGACC
 A C G T A C T G G A C T A C G T A G T C G T C A A C T G C T G A C T A G A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.47
Offset:5
Orientation:forward strand
Alignment:TGTTCAGAGCACWCTG-
-----AGGVNCCTTTGT
 A C G T A C T G G A C T A C G T A G T C G T C A A C T G C T G A C T A G A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T