Information for 7-TGACCTGGSWCWGBCT (Motif 12)

A C G T A C T G C G T A A T G C A G T C A C G T A C T G A C T G A T G C C G A T A T G C C G T A A C T G A T G C A G T C C G A T
Reverse Opposite:
C G T A A C T G T A C G G T A C C G A T A T C G G C T A A T C G A G T C A G T C C G T A A C T G A T C G G A C T A G T C G T C A
p-value:1e-10
log p-value:-2.492e+01
Information Content per bp:1.762
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif17.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets55.9 +/- 23.9bp
Average Position of motif in Background50.6 +/- 44.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA/MA0071.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGACCTGGSWCWGBCT
TGACCTTGAT------
 A C G T A C T G C G T A A T G C A G T C A C G T A C T G A C T G A T G C C G A T A T G C C G T A A C T G A T G C A G T C C G A T
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGACCTGGSWCWGBCT
TGACCT----------
 A C G T A C T G C G T A A T G C A G T C A C G T A C T G A C T G A T G C C G A T A T G C C G T A A C T G A T G C A G T C C G A T
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGACCTGGSWCWGBCT
TGACCTYA--------
 A C G T A C T G C G T A A T G C A G T C A C G T A C T G A C T G A T G C C G A T A T G C C G T A A C T G A T G C A G T C C G A T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGACCTGGSWCWGBCT
NTGACCTTGA-------
 A C G T A C G T A C T G C G T A A T G C A G T C A C G T A C T G A C T G A T G C C G A T A T G C C G T A A C T G A T G C A G T C C G A T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGACCTGGSWCWGBCT
GCTGACCTTGAACTN---
 A C G T A C G T A C G T A C T G C G T A A T G C A G T C A C G T A C T G A C T G A T G C C G A T A T G C C G T A A C T G A T G C A G T C C G A T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGACCTGGSWCWGBCT
BNTGDCCTTG--------
 A C G T A C G T A C G T A C T G C G T A A T G C A G T C A C G T A C T G A C T G A T G C C G A T A T G C C G T A A C T G A T G C A G T C C G A T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGACCTGGSWCWGBCT
TGACCTTGAV------
 A C G T A C T G C G T A A T G C A G T C A C G T A C T G A C T G A T G C C G A T A T G C C G T A A C T G A T G C A G T C C G A T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGACCTGGSWCWGBCT
NATGACCTTGA-------
 A C G T A C G T A C G T A C T G C G T A A T G C A G T C A C G T A C T G A C T G A T G C C G A T A T G C C G T A A C T G A T G C A G T C C G A T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTGGSWCWGBCT
ATGACCTTGA-------
 A C G T A C G T A C T G C G T A A T G C A G T C A C G T A C T G A C T G A T G C C G A T A T G C C G T A A C T G A T G C A G T C C G A T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGACCTGGSWCWGBCT
NGATGACGTGGCAN-----
 A C G T A C G T A C G T A C G T A C T G C G T A A T G C A G T C A C G T A C T G A C T G A T G C C G A T A T G C C G T A A C T G A T G C A G T C C G A T
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C A C G T A C G T A C G T A C G T A C G T