Information for 5-CTGCTGTGCACCTTCT (Motif 10)

A G T C C G A T A T C G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C G T A C A G C T A C G T A G T C A G C T
Reverse Opposite:
C T G A A C T G C G T A C T G A A C T G C T A G C G A T A C T G A G T C C G T A G T A C C G T A A C T G A T G C C G T A A C T G
p-value:1e-11
log p-value:-2.555e+01
Information Content per bp:1.905
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 25.8bp
Average Position of motif in Background14.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTGCTGTGCACCTTCT-
CAGATGTGCACATACGT
 A G T C C G A T A T C G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C G T A C A G C T A C G T A G T C A G C T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGTGCACCTTCT
NNTCCTGCTGTGNNN-----
 A C G T A C G T A C G T A C G T A G T C C G A T A T C G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C G T A C A G C T A C G T A G T C A G C T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGTGCACCTTCT
CCCCCTGCTGTG--------
 A C G T A C G T A C G T A C G T A G T C C G A T A T C G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C G T A C A G C T A C G T A G T C A G C T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGTGCACCTTCT
TNTCCTGCTGTGNNG-----
 A C G T A C G T A C G T A C G T A G T C C G A T A T C G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C G T A C A G C T A C G T A G T C A G C T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CTGCTGTGCACCTTCT
GGCCYCCTGCTGDGH-------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A T C G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C G T A C A G C T A C G T A G T C A G C T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGCTGTGCACCTTCT-
TACATGTGCACATAAAA
 A G T C C G A T A T C G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C G T A C A G C T A C G T A G T C A G C T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGTGCACCTTCT
TCNCCTGCTGNGNNN-----
 A C G T A C G T A C G T A C G T A G T C C G A T A T C G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C G T A C A G C T A C G T A G T C A G C T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTGCTGTGCACCTTCT
--GCTGTG--------
 A G T C C G A T A T C G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C G T A C A G C T A C G T A G T C A G C T
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGCTGTGCACCTTCT
CCTGCTGAGH-------
 A C G T A G T C C G A T A T C G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C G T A C A G C T A C G T A G T C A G C T
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGTGCACCTTCT
NNNANTGCAGTGCNNTT---
 A C G T A C G T A C G T A C G T A G T C C G A T A T C G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A G T C G T A C A G C T A C G T A G T C A G C T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T A C G T