Information for 9-AKGGGCTTAC (Motif 36)

C G T A C A T G A C T G A C T G A C T G A T G C C G A T C G A T C G T A A T G C
Reverse Opposite:
T A C G A C G T C G T A C G T A A T C G A G T C A G T C A G T C G T A C A C G T
p-value:1e-7
log p-value:-1.649e+01
Information Content per bp:1.805
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif65.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets46.9 +/- 31.4bp
Average Position of motif in Background53.0 +/- 45.2bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AKGGGCTTAC
AAGAGGATTAG
 A C G T C G T A C A T G A C T G A C T G A C T G A T G C C G A T C G A T C G T A A T G C
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AKGGGCTTAC
-NGGGATTA-
 C G T A C A T G A C T G A C T G A C T G A T G C C G A T C G A T C G T A A T G C
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AKGGGCTTAC-
--GGGATTANN
 C G T A C A T G A C T G A C T G A C T G A T G C C G A T C G A T C G T A A T G C A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

PH0121.1_Obox1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AKGGGCTTAC----
TTAAGGGGATTAACTAC
 A C G T A C G T A C G T C G T A C A T G A C T G A C T G A C T G A T G C C G A T C G A T C G T A A T G C A C G T A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AKGGGCTTAC
--GGGATTAA
 C G T A C A T G A C T G A C T G A C T G A T G C C G A T C G A T C G T A A T G C
A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AKGGGCTTAC----
NNNTNGGGCGTATNNTN
 A C G T A C G T A C G T C G T A C A T G A C T G A C T G A C T G A T G C C G A T C G A T C G T A A T G C A C G T A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AKGGGCTTAC
GGAGGGGGAA--
 A C G T A C G T C G T A C A T G A C T G A C T G A C T G A T G C C G A T C G A T C G T A A T G C
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AKGGGCTTAC----
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T C G T A C A T G A C T G A C T G A C T G A T G C C G A T C G A T C G T A A T G C A C G T A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AKGGGCTTAC--
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T C G T A C A T G A C T G A C T G A C T G A T G C C G A T C G A T C G T A A T G C A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PH0129.1_Otx1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AKGGGCTTAC-----
AGAGGGGATTAATTTAT
 A C G T A C G T C G T A C A T G A C T G A C T G A C T G A T G C C G A T C G A T C G T A A T G C A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T