Information for 22-TCCTATGAGTGCCAGG (Motif 32)

C G A T A G T C A G T C A C G T C G T A A C G T A C T G C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A C T G A T G C G T C A G T A C A G C T A G T C G T C A A C G T G T C A A C T G A C T G C G T A
p-value:1e-8
log p-value:-2.008e+01
Information Content per bp:1.910
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.2 +/- 30.8bp
Average Position of motif in Background54.2 +/- 1.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TCCTATGAGTGCCAGG-
-----TGAGTGACAGSC
 C G A T A G T C A G T C A C G T C G T A A C G T A C T G C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TCCTATGAGTGCCAGG
----NTGATTGACAGN
 C G A T A G T C A G T C A C G T C G T A A C G T A C T G C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TCCTATGAGTGCCAGG
----BTGABTGACAGS
 C G A T A G T C A G T C A C G T C G T A A C G T A C T G C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.57
Offset:8
Orientation:forward strand
Alignment:TCCTATGAGTGCCAGG
--------TTGCCAAG
 C G A T A G T C A G T C A C G T C G T A A C G T A C T G C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.55
Offset:7
Orientation:forward strand
Alignment:TCCTATGAGTGCCAGG
-------CGTGCCAAG
 C G A T A G T C A G T C A C G T C G T A A C G T A C T G C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:TCCTATGAGTGCCAGG
---------TGCCAA-
 C G A T A G T C A G T C A C G T C G T A A C G T A C T G C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.51
Offset:7
Orientation:forward strand
Alignment:TCCTATGAGTGCCAGG-
-------GGTGCCAAGT
 C G A T A G T C A G T C A C G T C G T A A C G T A C T G C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:TCCTATGAGTGCCAGG-
-------VBTGWCAGCB
 C G A T A G T C A G T C A C G T C G T A A C G T A C T G C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TCCTATGAGTGCCAGG-----
-----NNATTGACAGGTGCTT
 C G A T A G T C A G T C A C G T C G T A A C G T A C T G C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TCCTATGAGTGCCAGG
---CTTGAGTGGCT--
 C G A T A G T C A G T C A C G T C G T A A C G T A C T G C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T