p-value: | 1e-9 |
log p-value: | -2.136e+01 |
Information Content per bp: | 1.592 |
Number of Target Sequences with motif | 55.0 |
Percentage of Target Sequences with motif | 9.15% |
Number of Background Sequences with motif | 1473.1 |
Percentage of Background Sequences with motif | 3.60% |
Average Position of motif in Targets | 48.9 +/- 24.0bp |
Average Position of motif in Background | 48.9 +/- 38.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.11 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer
Match Rank: | 1 |
Score: | 0.69 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTGCACTCCCTGBCCW-- NNNTGAACTCNNTGACCTCN |
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GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGCACTCCCTGBCCW NAGNACANNNTGTNCT |
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ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTGCACTCCCTGBCCW NAGAACAGNCTGTNCT |
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RXRA::VDR/MA0074.1/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTGCACTCCCTGBCCW -TGAACCCGATGACCC |
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PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGCACTCCCTGBCCW VAGRACAKNCTGTBC- |
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HIC2/MA0738.1/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGCACTCCCTGBCCW ATGCCCACC------- |
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GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGCACTCCCTGBCCW VAGRACAKWCTGTYC- |
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PB0130.1_Gm397_2/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTGCACTCCCTGBCCW AGCGGCACACACGCAA-- |
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Vdr/MA0693.1/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTGCACTCCCTGBCCW- -TGAACTCNATGAACTC |
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PB0091.1_Zbtb3_1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------CTGCACTCCCTGBCCW AATCGCACTGCATTCCG------ |
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