Information for 3-TGCAGGGTAT (Motif 20)

C G A T A C T G A G T C C G T A A C T G A T C G A C T G A G C T T C G A C G A T
Reverse Opposite:
G C T A A G C T T C G A T G A C T A G C A G T C A C G T C T A G G T A C C G T A
p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.756
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.99%
Number of Background Sequences with motif280.9
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets51.4 +/- 22.0bp
Average Position of motif in Background49.4 +/- 39.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TGCAGGGTAT--
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G A G T C C G T A A C T G A T C G A C T G A G C T T C G A C G A T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCAGGGTAT
CACAGN----
 C G A T A C T G A G T C C G T A A C T G A T C G A C T G A G C T T C G A C G A T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGCAGGGTAT
CACAGCAGGGGG-
 A C G T A C G T A C G T C G A T A C T G A G T C C G T A A C T G A T C G A C T G A G C T T C G A C G A T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGCAGGGTAT
NGAAGC----
 C G A T A C T G A G T C C G T A A C T G A T C G A C T G A G C T T C G A C G A T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGCAGGGTAT
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G A G T C C G T A A C T G A T C G A C T G A G C T T C G A C G A T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.55
Offset:-12
Orientation:forward strand
Alignment:------------TGCAGGGTAT
TTTTTTTTTTTTTTCAGGTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A G T C C G T A A C T G A T C G A C T G A G C T T C G A C G A T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGCAGGGTAT----
---AGGGTAACAGC
 C G A T A C T G A G T C C G T A A C T G A T C G A C T G A G C T T C G A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.54
Offset:-12
Orientation:forward strand
Alignment:------------TGCAGGGTAT
TTTTTTTTTTTTTTCAGGTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A G T C C G T A A C T G A T C G A C T G A G C T T C G A C G A T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGGGTAT-
SDGCAGGTGCNS
 A C G T C G A T A C T G A G T C C G T A A C T G A T C G A C T G A G C T T C G A C G A T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCAGGGTAT
NACAGGAAAT
 C G A T A C T G A G T C C G T A A C T G A T C G A C T G A G C T T C G A C G A T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T