Information for 12-CACAGWGATGCTSCTY (Motif 17)

T A G C C G T A A T G C G C T A A C T G C G A T A T C G C G T A A C G T A T C G A G T C A C G T A T C G A G T C C G A T A G T C
Reverse Opposite:
T C A G C G T A A C T G A T G C C G T A C T A G T A G C C G T A A C G T A T G C C G T A A G T C C A G T A T C G C G A T A C T G
p-value:1e-9
log p-value:-2.095e+01
Information Content per bp:1.750
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.3 +/- 13.1bp
Average Position of motif in Background54.3 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CACAGWGATGCTSCTY----
-----AGATGCTRCTRCCHT
 T A G C C G T A A T G C G C T A A C T G C G A T A T C G C G T A A C G T A T C G A G T C A C G T A T C G A G T C C G A T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:2
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CACAGWGATGCTSCTY-
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T T A G C C G T A A T G C G C T A A C T G C G A T A T C G C G T A A C G T A T C G A G T C A C G T A T C G A G T C C G A T A G T C A C G T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CACAGWGATGCTSCTY
-----ACATCCTGNT-
 T A G C C G T A A T G C G C T A A C T G C G A T A T C G C G T A A C G T A T C G A G T C A C G T A T C G A G T C C G A T A G T C
A C G T A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CACAGWGATGCTSCTY
-----CNGTCCTCCC-
 T A G C C G T A A T G C G C T A A C T G C G A T A T C G C G T A A C G T A T C G A G T C A C G T A T C G A G T C C G A T A G T C
A C G T A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T

POL005.1_DPE/Jaspar

Match Rank:5
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CACAGWGATGCTSCTY
----NACATCTTN---
 T A G C C G T A A T G C G C T A A C T G C G A T A T C G C G T A A C G T A T C G A G T C A C G T A T C G A G T C C G A T A G T C
A C G T A C G T A C G T A C G T C T G A C T G A A T G C C T G A C G A T T A G C G A C T C A G T A G T C A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CACAGWGATGCTSCTY
-GCAGTGATTT-----
 T A G C C G T A A T G C G C T A A C T G C G A T A T C G C G T A A C G T A T C G A G T C A C G T A T C G A G T C C G A T A G T C
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CACAGWGATGCTSCTY
----GTCATN------
 T A G C C G T A A T G C G C T A A C T G C G A T A T C G C G T A A C G T A T C G A G T C A C G T A T C G A G T C C G A T A G T C
A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.47
Offset:2
Orientation:reverse strand
Alignment:CACAGWGATGCTSCTY
--CNGTGATTTN----
 T A G C C G T A A T G C G C T A A C T G C G A T A T C G C G T A A C G T A T C G A G T C A C G T A T C G A G T C C G A T A G T C
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.47
Offset:5
Orientation:forward strand
Alignment:CACAGWGATGCTSCTY-----
-----ACATGCTACCTAATAC
 T A G C C G T A A T G C G C T A A C T G C G A T A T C G C G T A A C G T A T C G A G T C A C G T A T C G A G T C C G A T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.46
Offset:9
Orientation:forward strand
Alignment:CACAGWGATGCTSCTY
---------GCTCCG-
 T A G C C G T A A T G C G C T A A C T G C G A T A T C G C G T A A C G T A T C G A G T C A C G T A T C G A G T C C G A T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T