Information for 12-GMKGGCAWCTTGR (Motif 13)

A T C G G T C A A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A C G T A A C T G C G T A A C G T A C T G T A G C A G T C G T A C A C G T A T G C
p-value:1e-10
log p-value:-2.336e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.5 +/- 23.2bp
Average Position of motif in Background75.9 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GMKGGCAWCTTGR
GCCGCCATCTTG-
 A T C G G T C A A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A C T G C T G A
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GMKGGCAWCTTGR
GCNGCCATCTTG-
 A T C G G T C A A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A C T G C T G A
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GMKGGCAWCTTGR
NGTGGGCAT-----
 A C G T A T C G G T C A A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A C T G C T G A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GMKGGCAWCTTGR
GGTTGGCAT-----
 A C G T A T C G G T C A A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A C T G C T G A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GMKGGCAWCTTGR
TNNGGGCAG-----
 A C G T A T C G G T C A A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A C T G C T G A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GMKGGCAWCTTGR
NGTAGGTTGGCATNNN--
 A C G T A C G T A C G T A C G T A C G T A T C G G T C A A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A C T G C T G A
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GMKGGCAWCTTGR--
NAGGTCACNNTGACC
 A T C G G T C A A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A C T G C T G A A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

PROX1/MA0794.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GMKGGCAWCTTGR
TAAGGCGTCTTG-
 A T C G G T C A A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A C T G C T G A
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T

ESR2/MA0258.2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GMKGGCAWCTTGR---
-AGGTCACCCTGACCT
 A T C G G T C A A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A C T G C T G A A C G T A C G T A C G T
A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GMKGGCAWCTTGR-----
-ATAACCACTTGAAAATT
 A T C G G T C A A C T G A C T G A C T G A G T C C G T A C G A T A G T C A C G T A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T