Information for 13-NDGCCCGGGCANN (Motif 17)

T C A G C A G T T A C G G A T C G T A C G A T C C A T G C A T G C T A G G A T C G C T A A T C G A T C G
Reverse Opposite:
T A G C T A G C C G A T C T A G G A T C G T A C G T A C C T A G C A T G C T A G A T G C G T C A A G T C
p-value:1e-4
log p-value:-1.000e+01
Information Content per bp:1.376
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.0 +/- 10.4bp
Average Position of motif in Background47.0 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:NDGCCCGGGCANN-
ATGCCCGGGCATGT
 T C A G C A G T T A C G G A T C G T A C G A T C C A T G C A T G C T A G G A T C G C T A A T C G A T C G A C G T
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:NDGCCCGGGCANN
-WDNCTGGGCA--
 T C A G C A G T T A C G G A T C G T A C G A T C C A T G C A T G C T A G G A T C G C T A A T C G A T C G
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:NDGCCCGGGCANN
---NGTGGGCAT-
 T C A G C A G T T A C G G A T C G T A C G A T C C A T G C A T G C T A G G A T C G C T A A T C G A T C G
A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

TP53/MA0106.3/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---NDGCCCGGGCANN--
GACATGCCCGGGCATGTT
 A C G T A C G T A C G T T C A G C A G T T A C G G A T C G T A C G A T C C A T G C A T G C T A G G A T C G C T A A T C G A T C G A C G T A C G T
C T A G C T G A G A T C C G T A C G A T T A C G G A T C G A T C G A T C T C A G C T A G C T A G A G T C C G T A G C A T C T A G G A C T G A C T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:NDGCCCGGGCANN
---TNNGGGCAG-
 T C A G C A G T T A C G G A T C G T A C G A T C C A T G C A T G C T A G G A T C G C T A A T C G A T C G
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:NDGCCCGGGCANN---
NNNNTTGGGCACNNCN
 T C A G C A G T T A C G G A T C G T A C G A T C C A T G C A T G C T A G G A T C G C T A A T C G A T C G A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:NDGCCCGGGCANN
GAGSCCGAGC---
 T C A G C A G T T A C G G A T C G T A C G A T C C A T G C A T G C T A G G A T C G C T A A T C G A T C G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:8
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----NDGCCCGGGCANN--
NGGGCATGTCTGGGCATGTT
 A C G T A C G T A C G T A C G T A C G T T C A G C A G T T A C G G A T C G T A C G A T C C A T G C A T G C T A G G A T C G C T A A T C G A T C G A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:9
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----NDGCCCGGGCANN--
NGGGCATGTCTGGGCATGTT
 A C G T A C G T A C G T A C G T A C G T T C A G C A G T T A C G G A T C G T A C G A T C C A T G C A T G C T A G G A T C G C T A A T C G A T C G A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----NDGCCCGGGCANN--
NRRRCAWGTCCDGRCATGYY
 A C G T A C G T A C G T A C G T A C G T T C A G C A G T T A C G G A T C G T A C G A T C C A T G C A T G C T A G G A T C G C T A A T C G A T C G A C G T A C G T
C G T A C T G A C T A G C T G A A G T C G C T A C G A T A T C G G A C T G A T C A G T C C T G A C T A G C T A G A G T C G C T A C G A T C T A G G A T C G A T C