Information for 12-ASWTTACAAKCRC (Motif 16)

C G T A A T C G C G A T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A G T C C T G A A G T C
Reverse Opposite:
A C T G A G C T A C T G T G C A A C G T A C G T A C T G A C G T C G T A C G T A C G T A A T G C A C G T
p-value:1e-7
log p-value:-1.686e+01
Information Content per bp:1.879
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.3 +/- 22.1bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRY/MA0084.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ASWTTACAAKCRC
-GTAAACAAT---
 C G T A A T C G C G A T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A G T C C T G A A G T C
A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ASWTTACAAKCRC-
TAAGATTATAATACGG
 A C G T A C G T C G T A A T C G C G A T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A G T C C T G A A G T C A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ASWTTACAAKCRC
NTTTTACGAGN--
 C G T A A T C G C G A T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A G T C C T G A A G T C
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ASWTTACAAKCRC-
ANATTTTACGAGNNNN
 A C G T A C G T C G T A A T C G C G A T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A G T C C T G A A G T C A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXC12/MA0906.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ASWTTACAAKCRC
NTTTTACGACC--
 C G T A A T C G C G A T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A G T C C T G A A G T C
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ASWTTACAAKCRC
ANTTTTACGACC--
 A C G T C G T A A T C G C G A T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A G T C C T G A A G T C
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ASWTTACAAKCRC
NTTTTACGACC--
 C G T A A T C G C G A T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A G T C C T G A A G T C
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C A C G T A C G T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ASWTTACAAKCRC
NNAGATNVNWATCTN
 A C G T A C G T C G T A A T C G C G A T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A G T C C T G A A G T C
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ASWTTACAAKCRC
-----CCAATCAA
 C G T A A T C G C G A T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A G T C C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PH0068.1_Hoxc13/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ASWTTACAAKCRC-
NAATTTTACGAGNTNN
 A C G T A C G T C G T A A T C G C G A T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A G T C C T G A A G T C A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T