Information for 3-GCTTGYTGCTCCT (Motif 9)

C A T G A T G C A G C T C G A T A T C G A G T C A C G T A T C G G A T C A C G T A G T C G T A C G A C T
Reverse Opposite:
C T G A A C T G C T A G C G T A C A T G T A G C T C G A T C A G T A G C G C T A C T G A T A C G G A T C
p-value:1e-7
log p-value:-1.840e+01
Information Content per bp:1.674
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif4.21%
Number of Background Sequences with motif178.6
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets50.2 +/- 25.2bp
Average Position of motif in Background49.3 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCTTGYTGCTCCT
---CNGTCCTCCC
 C A T G A T G C A G C T C G A T A T C G A G T C A C G T A T C G G A T C A C G T A G T C G T A C G A C T
A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGYTGCTCCT-
TGCCTGCGYCMCCTT
 A C G T C A T G A T G C A G C T C G A T A T C G A G T C A C G T A T C G G A T C A C G T A G T C G T A C G A C T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GCTTGYTGCTCCT
-------GCTCCG
 C A T G A T G C A G C T C G A T A T C G A G T C A C G T A T C G G A T C A C G T A G T C G T A C G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCTTGYTGCTCCT
---TKCTGTTCCA
 C A T G A T G C A G C T C G A T A T C G A G T C A C G T A T C G G A T C A C G T A G T C G T A C G A C T
A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

SCRT1/MA0743.1/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GCTTGYTGCTCCT
ANCCACCTGTTGCNC--
 A C G T A C G T A C G T A C G T C A T G A T G C A G C T C G A T A T C G A G T C A C G T A T C G G A T C A C G T A G T C G T A C G A C T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGYTGCTCCT
CCACCTGTTGCAT--
 A C G T A C G T C A T G A T G C A G C T C G A T A T C G A G T C A C G T A T C G G A T C A C G T A G T C G T A C G A C T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCTTGYTGCTCCT-----
---AGATGCTRCTRCCHT
 C A T G A T G C A G C T C G A T A T C G A G T C A C G T A T C G G A T C A C G T A G T C G T A C G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GCTTGYTGCTCCT
ACTTCCTGNT---
 C A T G A T G C A G C T C G A T A T C G A G T C A C G T A T C G G A T C A C G T A G T C G T A C G A C T
C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGYTGCTCCT
CACTTCCTGT----
 A C G T C A T G A T G C A G C T C G A T A T C G A G T C A C G T A T C G G A T C A C G T A G T C G T A C G A C T
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GCTTGYTGCTCCT--
-----TTCCCCCTAC
 C A T G A T G C A G C T C G A T A T C G A G T C A C G T A T C G G A T C A C G T A G T C G T A C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C