Information for 5-GGGTGHHHTGCADCAG (Motif 7)

A C T G A C T G A T C G A C G T A C T G G A C T G A C T G A C T A G C T A C T G A G T C C G T A C A T G A G T C C G T A C T A G
Reverse Opposite:
A G T C C G A T A C T G G A T C A C G T A C T G G T A C C T G A C G T A C G T A C G T A A G T C C G T A A T G C G T A C A G T C
p-value:1e-9
log p-value:-2.144e+01
Information Content per bp:1.771
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif15.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.0 +/- 11.0bp
Average Position of motif in Background49.1 +/- 40.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.56
Offset:10
Orientation:reverse strand
Alignment:GGGTGHHHTGCADCAG--
----------CAGCTGNT
 A C T G A C T G A T C G A C G T A C T G G A C T G A C T G A C T A G C T A C T G A G T C C G T A C A T G A G T C C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:2
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGGTGHHHTGCADCAG-
NVCAKCTGGNNNCCAGMTGB
 A C G T A C G T A C G T A C T G A C T G A T C G A C G T A C T G G A C T G A C T G A C T A G C T A C T G A G T C C G T A C A T G A G T C C G T A C T A G A C G T
T A C G T G A C T G A C C G T A A C T G T A G C C G A T A C T G A T C G A G C T A T G C T C G A T A G C G T A C C G T A A C T G T G A C G C A T A C T G A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.55
Offset:9
Orientation:forward strand
Alignment:GGGTGHHHTGCADCAG---
---------NCAGCTGCTG
 A C T G A C T G A T C G A C G T A C T G G A C T G A C T G A C T A G C T A C T G A G T C C G T A C A T G A G T C C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GGGTGHHHTGCADCAG
------ATTGCATCAK
 A C T G A C T G A T C G A C G T A C T G G A C T G A C T G A C T A G C T A C T G A G T C C G T A C A T G A G T C C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GGGTGHHHTGCADCAG
------ATTGCATCAT
 A C T G A C T G A T C G A C G T A C T G G A C T G A C T G A C T A G C T A C T G A G T C C G T A C A T G A G T C C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GGGTGHHHTGCADCAG----
--------NVCAGCTGBBNN
 A C T G A C T G A T C G A C G T A C T G G A C T G A C T G A C T A G C T A C T G A G T C C G T A C A T G A G T C C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GGGTGHHHTGCADCAG--
-------NNGCAGCTGTC
 A C T G A C T G A T C G A C G T A C T G G A C T G A C T G A C T A G C T A C T G A G T C C G T A C A T G A G T C C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GGGTGHHHTGCADCAG--
-------NNGCAGCTGTT
 A C T G A C T G A T C G A C G T A C T G G A C T G A C T G A C T A G C T A C T G A G T C C G T A C A T G A G T C C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GGGTGHHHTGCADCAG-
-------TTGCAACATN
 A C T G A C T G A T C G A C G T A C T G G A C T G A C T G A C T A G C T A C T G A G T C C G T A C A T G A G T C C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.53
Offset:8
Orientation:forward strand
Alignment:GGGTGHHHTGCADCAG-----
--------TGCAGCTGTCCCT
 A C T G A C T G A T C G A C G T A C T G G A C T G A C T G A C T A G C T A C T G A G T C C G T A C A T G A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T