Information for 1-GCGTTATGCG (Motif 4)

A C T G A G T C A C T G A C G T A C G T C G T A A C G T A C T G A G T C A T C G
Reverse Opposite:
A T G C A C T G A G T C C G T A C G A T C G T A C G T A A G T C A C T G A G T C
p-value:1e-10
log p-value:-2.386e+01
Information Content per bp:1.925
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 22.5bp
Average Position of motif in Background44.2 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GCGTTATGCG--
CAATGCATTGTGGGTA
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T C G T A A C G T A C T G A G T C A T C G A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCGTTATGCG--
GTNTTGTTGTGANNT
 A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T C G T A A C G T A C T G A G T C A T C G A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GCGTTATGCG
NNGTANTGTTTTNC-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T C G T A A C G T A C T G A G T C A T C G
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GCGTTATGCG-
WYATGCATWATGCAT
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T C G T A A C G T A C T G A G T C A T C G A C G T
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCGTTATGCG
TGCGTG-----
 A C G T A C T G A G T C A C T G A C G T A C G T C G T A A C G T A C T G A G T C A T C G
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCGTTATGCG--
--RTTATGYAAB
 A C T G A G T C A C T G A C G T A C G T C G T A A C G T A C T G A G T C A T C G A C G T A C G T
A C G T A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCGTTATGCG--
NNGCNCTGCGCGGC
 A C G T A C G T A C T G A G T C A C T G A C G T A C G T C G T A A C G T A C T G A G T C A T C G A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GCGTTATGCG---
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T C G T A A C G T A C T G A G T C A T C G A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCGTTATGCG
NGCCTNAGGCN
 A C G T A C T G A G T C A C T G A C G T A C G T C G T A A C G T A C T G A G T C A T C G
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

PH0148.1_Pou3f3/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCGTTATGCG------
TNNATTATGCATANNTT
 A C G T A C T G A G T C A C T G A C G T A C G T C G T A A C G T A C T G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T