Information for 1-GACTGCAGGCAAA (Motif 2)

A C T G G T C A A G T C A C G T A C T G A G T C C G T A A C T G A T C G G T A C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G A T G C A G T C C G A T A C T G A G T C C G T A A C T G A C G T A G T C
p-value:1e-11
log p-value:-2.719e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.8 +/- 10.6bp
Average Position of motif in Background48.1 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TGIF1/MA0796.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GACTGCAGGCAAA
TGACAGCTGTCA--
 A C G T A C T G G T C A A G T C A C G T A C T G A G T C C G T A A C T G A T C G G T A C C G T A C G T A C G T A
G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GACTGCAGGCAAA
--CTTCTGGGAAA
 A C T G G T C A A G T C A C G T A C T G A G T C C G T A A C T G A T C G G T A C C G T A C G T A C G T A
A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

TGIF2/MA0797.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GACTGCAGGCAAA
TGACAGCTGTCA--
 A C G T A C T G G T C A A G T C A C G T A C T G A G T C C G T A A C T G A T C G G T A C C G T A C G T A C G T A
G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GACTGCAGGCAAA
TGACACCTGTCA--
 A C G T A C T G G T C A A G T C A C G T A C T G A G T C C G T A A C T G A T C G G T A C C G T A C G T A C G T A
G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GACTGCAGGCAAA---
-----AAGGCAAGTGT
 A C T G G T C A A G T C A C G T A C T G A G T C C G T A A C T G A T C G G T A C C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GACTGCAGGCAAA
AGAGRRACAGCWGAC---
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A A G T C A C G T A C T G A G T C C G T A A C T G A T C G G T A C C G T A C G T A C G T A
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GACTGCAGGCAAA
--TBGCACGCAA-
 A C T G G T C A A G T C A C G T A C T G A G T C C G T A A C T G A T C G G T A C C G T A C G T A C G T A
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GACTGCAGGCAAA
---TNNGGGCAG-
 A C T G G T C A A G T C A C G T A C T G A G T C C G T A A C T G A T C G G T A C C G T A C G T A C G T A
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GACTGCAGGCAAA
TGCCCCAGGGCA--
 A C G T A C T G G T C A A G T C A C G T A C T G A G T C C G T A A C T G A T C G G T A C C G T A C G T A C G T A
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GACTGCAGGCAAA
TGCCCNGGGGCA--
 A C G T A C T G G T C A A G T C A C G T A C T G A G T C C G T A A C T G A T C G G T A C C G T A C G T A C G T A
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T