Information for 4-TGASCTRRGKAGT (Motif 9)

A C G T A C T G C G T A A T G C A G T C A C G T C T A G C T G A A T C G A C G T C G T A A T C G A C G T
Reverse Opposite:
C G T A A T G C A C G T G T C A A T G C A G C T A G T C C G T A A C T G A T C G A C G T A G T C C G T A
p-value:1e-8
log p-value:-1.919e+01
Information Content per bp:1.868
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif4.23%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.8 +/- 16.7bp
Average Position of motif in Background18.9 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGASCTRRGKAGT
TGACCTYA-----
 A C G T A C T G C G T A A T G C A G T C A C G T C T A G C T G A A T C G A C G T C G T A A T C G A C G T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGASCTRRGKAGT
TGACCT-------
 A C G T A C T G C G T A A T G C A G T C A C G T C T A G C T G A A T C G A C G T C G T A A T C G A C G T
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGASCTRRGKAGT
CTGACCTTTG----
 A C G T A C G T A C T G C G T A A T G C A G T C A C G T C T A G C T G A A T C G A C G T C G T A A T C G A C G T
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGASCTRRGKAGT
TGACCTTGAT---
 A C G T A C T G C G T A A T G C A G T C A C G T C T A G C T G A A T C G A C G T C G T A A T C G A C G T
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGASCTRRGKAGT
GTGACCTT------
 A C G T A C G T A C T G C G T A A T G C A G T C A C G T C T A G C T G A A T C G A C G T C G T A A T C G A C G T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGASCTRRGKAGT
TGACCTARTT---
 A C G T A C T G C G T A A T G C A G T C A C G T C T A G C T G A A T C G A C G T C G T A A T C G A C G T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGASCTRRGKAGT
TTGACCTANTTATN
 A C G T A C G T A C T G C G T A A T G C A G T C A C G T C T A G C T G A A T C G A C G T C G T A A T C G A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

PH0058.1_Hoxb3/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGASCTRRGKAGT----
TGAGCTAATTAGTTGGA
 A C G T A C T G C G T A A T G C A G T C A C G T C T A G C T G A A T C G A C G T C G T A A T C G A C G T A C G T A C G T A C G T A C G T
C G A T T C A G T G C A T A C G A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A G C T C A G T T C A G C T A G C G T A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGASCTRRGKAGT
NTGACCTTGA----
 A C G T A C G T A C T G C G T A A T G C A G T C A C G T C T A G C T G A A T C G A C G T C G T A A T C G A C G T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGASCTRRGKAGT
CNNTTGACCTTTG----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A T G C A G T C A C G T C T A G C T G A A T C G A C G T C G T A A T C G A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T A C G T A C G T