Information for 2-TCYTGCTGTCTTTCTC (Motif 5)

A G C T A G T C A G C T A C G T C T A G A T G C A C G T A C T G A C G T A G T C A G C T A C G T A G C T G A T C A C G T A G T C
Reverse Opposite:
T C A G C G T A C T A G C T G A G T C A C T G A A C T G C G T A T G A C C G T A A T C G A G T C G T C A C T G A A C T G C T G A
p-value:1e-10
log p-value:-2.318e+01
Information Content per bp:1.758
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif7.04%
Number of Background Sequences with motif17.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.1 +/- 21.0bp
Average Position of motif in Background54.5 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1/MA0050.2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCYTGCTGTCTTTCTC-----
TTTTACTTTCACTTTCACTTT
 A G C T A G T C A G C T A C G T C T A G A T G C A C G T A C T G A C G T A G T C A G C T A C G T A G C T G A T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TCYTGCTGTCTTTCTC
----ACTTTCACTTTC
 A G C T A G T C A G C T A C G T C T A G A T G C A C G T A C T G A C G T A G T C A G C T A C G T A G C T G A T C A C G T A G T C
A C G T A C G T A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCYTGCTGTCTTTCTC-
--TCAGTTTCATTTTCC
 A G C T A G T C A G C T A C G T C T A G A T G C A C G T A C T G A C G T A G T C A G C T A C G T A G C T G A T C A C G T A G T C A C G T
A C G T A C G T C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TCYTGCTGTCTTTCTC
----AGTTTCAGTTTC
 A G C T A G T C A G C T A C G T C T A G A T G C A C G T A C T G A C G T A G T C A G C T A C G T A G C T G A T C A C G T A G T C
A C G T A C G T A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

IRF2/MA0051.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCYTGCTGTCTTTCTC-
GTTTTGCTTTCACTTTCC
 A C G T A G C T A G T C A G C T A C G T C T A G A T G C A C G T A C T G A C G T A G T C A G C T A C G T A G C T G A T C A C G T A G T C A C G T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCYTGCTGTCTTTCTC
----RSTTTCRSTTTC
 A G C T A G T C A G C T A C G T C T A G A T G C A C G T A C T G A C G T A G T C A G C T A C G T A G C T G A T C A C G T A G T C
A C G T A C G T A C G T A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCYTGCTGTCTTTCTC
NNTCCTGCTGTGNNN---
 A C G T A C G T A G C T A G T C A G C T A C G T C T A G A T G C A C G T A C T G A C G T A G T C A G C T A C G T A G C T G A T C A C G T A G T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCYTGCTGTCTTTCTC-
--TCACTTTCACTTTCN
 A G C T A G T C A G C T A C G T C T A G A T G C A C G T A C T G A C G T A G T C A G C T A C G T A G C T G A T C A C G T A G T C A C G T
A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TCYTGCTGTCTTTCTC
----AGTTTCAKTTTC
 A G C T A G T C A G C T A C G T C T A G A T G C A C G T A C T G A C G T A G T C A G C T A C G T A G C T G A T C A C G T A G T C
A C G T A C G T A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TCYTGCTGTCTTTCTC-----
---NAGTTTCABTHTGACTNW
 A G C T A G T C A G C T A C G T C T A G A T G C A C G T A C T G A C G T A G T C A G C T A C G T A G C T G A T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A