Information for 1-TTCAAGTGTCTCTAGV (Motif 1)

A C G T A C G T A G T C C G T A C G T A A C T G C G A T A C T G C G A T G T A C A C G T G T A C A G C T C T G A A C T G T A C G
Reverse Opposite:
A G T C G T A C A G C T C T G A A C T G C G T A A C T G C G T A A G T C C G T A A G T C C G A T C G A T A C T G C G T A G T C A
p-value:1e-16
log p-value:-3.732e+01
Information Content per bp:1.775
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif7.04%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.6 +/- 13.7bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTCAAGTGTCTCTAGV
NANTTTCAAGTGGTTAN---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G A T A C T G C G A T G T A C A C G T G T A C A G C T C T G A A C T G T A C G
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTCAAGTGTCTCTAGV
AANTTCAAGTGGCTTN---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G A T A C T G C G A T G T A C A C G T G T A C A G C T C T G A A C T G T A C G
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTCAAGTGTCTCTAGV
RTCATGTGAC------
 A C G T A C G T A G T C C G T A C G T A A C T G C G A T A C T G C G A T G T A C A C G T G T A C A G C T C T G A A C T G T A C G
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTCAAGTGTCTCTAGV
AATTTCAAGTGGCTTN---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G A T A C T G C G A T G T A C A C G T G T A C A G C T C T G A A C T G T A C G
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTCAAGTGTCTCTAGV
AAATTCAAGTGGNTTN---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G A T A C T G C G A T G T A C A C G T G T A C A G C T C T G A A C T G T A C G
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTCAAGTGTCTCTAGV
NTCAAGTGG-------
 A C G T A C G T A G T C C G T A C G T A A C T G C G A T A C T G C G A T G T A C A C G T G T A C A G C T C T G A A C T G T A C G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTCAAGTGTCTCTAGV
GTCATGTGACC-----
 A C G T A C G T A G T C C G T A C G T A A C T G C G A T A C T G C G A T G T A C A C G T G T A C A G C T C T G A A C T G T A C G
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T A C G T A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTCAAGTGTCTCTAGV
GTCACGTGACYV----
 A C G T A C G T A G T C C G T A C G T A A C T G C G A T A C T G C G A T G T A C A C G T G T A C A G C T C T G A A C T G T A C G
T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTCAAGTGTCTCTAGV
NTCAAGTGGN------
 A C G T A C G T A G T C C G T A C G T A A C T G C G A T A C T G C G A T G T A C A C G T G T A C A G C T C T G A A C T G T A C G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTCAAGTGTCTCTAGV
AATNTTAAGTGGNTNN---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G A T A C T G C G A T G T A C A C G T G T A C A G C T C T G A A C T G T A C G
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A A C G T A C G T A C G T