Information for 20-CGAGGTCACCCTC (Motif 41)

A G T C A T C G C G T A A C T G A T C G A G C T G T A C C G T A A G T C G T A C A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C T G C T A G A C G T A C T G C T G A A T G C G T A C A C G T A T G C C T A G
p-value:1e-7
log p-value:-1.764e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.3 +/- 18.8bp
Average Position of motif in Background40.1 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGAGGTCACCCTC
ATGACGTCATCN--
 A C G T A G T C A T C G C G T A A C T G A T C G A G C T G T A C C G T A A G T C G T A C A G T C A C G T A G T C
T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGAGGTCACCCTC
TRAGGTCA-----
 A G T C A T C G C G T A A C T G A T C G A G C T G T A C C G T A A G T C G T A C A G T C A C G T A G T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGAGGTCACCCTC
RTGACGTCAYCN--
 A C G T A G T C A T C G C G T A A C T G A T C G A G C T G T A C C G T A A G T C G T A C A G T C A C G T A G T C
T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGAGGTCACCCTC
-GCTGTTACCCT-
 A G T C A T C G C G T A A C T G A T C G A G C T G T A C C G T A A G T C G T A C A G T C A C G T A G T C
A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGAGGTCACCCTC
ATGACGTCAYYN--
 A C G T A G T C A T C G C G T A A C T G A T C G A G C T G T A C C G T A A G T C G T A C A G T C A C G T A G T C
T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGAGGTCACCCTC
-AAGGTCAC----
 A G T C A T C G C G T A A C T G A T C G A G C T G T A C C G T A A G T C G T A C A G T C A C G T A G T C
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGAGGTCACCCTC
ATGACGTCATCN--
 A C G T A G T C A T C G C G T A A C T G A T C G A G C T G T A C C G T A A G T C G T A C A G T C A C G T A G T C
T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A A C G T A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CGAGGTCACCCTC
AAAGATGATGTCATC---
 A C G T A C G T A C G T A C G T A C G T A G T C A T C G C G T A A C T G A T C G A G C T G T A C C G T A A G T C G T A C A G T C A C G T A G T C
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C A C G T A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGAGGTCACCCTC
AAGATGATGTCAT----
 A C G T A C G T A C G T A C G T A G T C A T C G C G T A A C T G A T C G A G C T G T A C C G T A A G T C G T A C A G T C A C G T A G T C
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGAGGTCACCCTC
AGRGGTCA-----
 A G T C A T C G C G T A A C T G A T C G A G C T G T A C C G T A A G T C G T A C A G T C A C G T A G T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T