Information for 18-GTGYAGACMAGCA (Motif 38)

T A C G C G A T C T A G A G T C C G T A C T A G C T G A A G T C G T C A G C T A T A C G A G T C C G T A
Reverse Opposite:
A C G T A C T G A T G C C G A T A C G T A C T G A G C T A G T C C G A T T C A G G A T C C G T A A T G C
p-value:1e-8
log p-value:-1.852e+01
Information Content per bp:1.772
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif24.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets58.4 +/- 23.6bp
Average Position of motif in Background51.6 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGYAGACMAGCA
CGTCTAGACA----
 A C G T T A C G C G A T C T A G A G T C C G T A C T A G C T G A A G T C G T C A G C T A T A C G A G T C C G T A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGYAGACMAGCA
GGTGYTGACAGS--
 A C G T T A C G C G A T C T A G A G T C C G T A C T A G C T G A A G T C G T C A G C T A T A C G A G T C C G T A
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTGYAGACMAGCA----
CATAAGACCACCATTAC
 T A C G C G A T C T A G A G T C C G T A C T A G C T G A A G T C G T C A G C T A T A C G A G T C C G T A A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTGYAGACMAGCA
ATGTAAACADGS-
 T A C G C G A T C T A G A G T C C G T A C T A G C T G A A G T C G T C A G C T A T A C G A G T C C G T A
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GTGYAGACMAGCA
--BCAGACWA---
 T A C G C G A T C T A G A G T C C G T A C T A G C T G A A G T C G T C A G C T A T A C G A G T C C G T A
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GTGYAGACMAGCA
--CCAGACRSVB-
 T A C G C G A T C T A G A G T C C G T A C T A G C T G A A G T C G T C A G C T A T A C G A G T C C G T A
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GTGYAGACMAGCA----
--SCAGYCADGCATGAC
 T A C G C G A T C T A G A G T C C G T A C T A G C T G A A G T C G T C A G C T A T A C G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------GTGYAGACMAGCA
NNNVCTGWGYAAACASN--
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G A T C T A G A G T C C G T A C T A G C T G A A G T C G T C A G C T A T A C G A G T C C G T A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T

FOXO3/MA0157.2/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GTGYAGACMAGCA
--GTAAACAA---
 T A C G C G A T C T A G A G T C C G T A C T A G C T G A A G T C G T C A G C T A T A C G A G T C C G T A
A C G T A C G T C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GTGYAGACMAGCA
TATGTAAACANG--
 A C G T T A C G C G A T C T A G A G T C C G T A C T A G C T G A A G T C G T C A G C T A T A C G A G T C C G T A
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T A C G T