Information for 20-GCTGTCGTGCCTGCCT (Motif 34)

A C T G A G T C A C G T A C T G A C G T G T A C A C T G A C G T A C T G A T G C A G T C A C G T A C T G A T G C A G T C A C G T
Reverse Opposite:
C G T A A C T G A T C G A G T C G T C A C T A G A T C G A G T C G T C A A G T C C A T G C G T A A G T C C G T A A C T G A G T C
p-value:1e-8
log p-value:-1.968e+01
Information Content per bp:1.918
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 24.8bp
Average Position of motif in Background11.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCTGTCGTGCCTGCCT--
---GTCATGCHTGRCTGS
 A C T G A G T C A C G T A C T G A C G T G T A C A C T G A C G T A C T G A T G C A G T C A C G T A C T G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTGTCGTGCCTGCCT--
--NGTCACGCTTGGCTGC
 A C T G A G T C A C G T A C T G A C G T G T A C A C T G A C G T A C T G A T G C A G T C A C G T A C T G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCTGTCGTGCCTGCCT
GCTGTG----------
 A C T G A G T C A C G T A C T G A C G T G T A C A C T G A C G T A C T G A T G C A G T C A C G T A C T G A T G C A G T C A C G T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GCTGTCGTGCCTGCCT-
------NNACTTGCCTT
 A C T G A G T C A C G T A C T G A C G T G T A C A C T G A C G T A C T G A T G C A G T C A C G T A C T G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCTGTCGTGCCTGCCT------
---GTCACGCTTGGCTGCNCNN
 A C T G A G T C A C G T A C T G A C G T G T A C A C T G A C G T A C T G A T G C A G T C A C G T A C T G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GCTGTCGTGCCTGCCT
GCTGTGGTTT------
 A C T G A G T C A C G T A C T G A C G T G T A C A C T G A C G T A C T G A T G C A G T C A C G T A C T G A T G C A G T C A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCTGTCGTGCCTGCCT
TGCAGTCATGCGTGACG
 A C G T A C T G A G T C A C G T A C T G A C G T G T A C A C T G A C G T A C T G A T G C A G T C A C G T A C T G A T G C A G T C A C G T
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:GCTGTCGTGCCTGCCT
------TTGCGTGCVA
 A C T G A G T C A C G T A C T G A C G T G T A C A C T G A C G T A C T G A T G C A G T C A C G T A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

XBP1/MA0844.1/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GCTGTCGTGCCTGCCT
GATGACGTGGCANT--
 A C T G A G T C A C G T A C T G A C G T G T A C A C T G A C G T A C T G A T G C A G T C A C G T A C T G A T G C A G T C A C G T
T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GCTGTCGTGCCTGCCT---
---ACTATGCCAACCTACC
 A C T G A G T C A C G T A C T G A C G T G T A C A C T G A C G T A C T G A T G C A G T C A C G T A C T G A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C