Information for 19-GGTTGGAGATCATCCC (Motif 28)

A C T G A T C G A G C T A C G T C A T G A T C G C G T A T A C G G C T A G A C T A G T C G C T A A G C T A G T C G A T C G A T C
Reverse Opposite:
C T A G C T A G T C A G T C G A C G A T T C A G C T G A C G A T A T G C G C A T T A G C G T A C T G C A T C G A T A G C T G A C
p-value:1e-9
log p-value:-2.076e+01
Information Content per bp:1.551
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.95%
Number of Background Sequences with motif735.9
Percentage of Background Sequences with motif1.56%
Average Position of motif in Targets53.8 +/- 22.6bp
Average Position of motif in Background49.5 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGTTGGAGATCATCCC
GGTTAGAGACCT----
 A C T G A T C G A G C T A C G T C A T G A T C G C G T A T A C G G C T A G A C T A G T C G C T A A G C T A G T C G A T C G A T C
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:2
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GGTTGGAGATCATCCC
CTAAGGTTCTAGATCAC---
 A C G T A C G T A C G T A C G T A C T G A T C G A G C T A C G T C A T G A T C G C G T A T A C G G C T A G A C T A G T C G C T A A G C T A G T C G A T C G A T C
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C A C G T A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:3
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GGTTGGAGATCATCCC
CGTTGGGGATTAGCCT
 A C T G A T C G A G C T A C G T C A T G A T C G C G T A T A C G G C T A G A C T A G T C G C T A A G C T A G T C G A T C G A T C
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

PH0139.1_Pitx3/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GGTTGGAGATCATCCC---
---GNNAGCTAATCCCCCN
 A C T G A T C G A G C T A C G T C A T G A T C G C G T A T A C G G C T A G A C T A G T C G C T A A G C T A G T C G A T C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

PH0123.1_Obox3/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GGTTGGAGATCATCCC-----
----ATAGTTAATCCCCCNNA
 A C T G A T C G A G C T A C G T C A T G A T C G C G T A T A C G G C T A G A C T A G T C G C T A A G C T A G T C G A T C G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0121.1_Obox1/Jaspar

Match Rank:6
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GGTTGGAGATCATCCC-----
----NTAGTTAATCCCCTTAN
 A C T G A T C G A G C T A C G T C A T G A T C G C G T A T A C G G C T A G A C T A G T C G C T A A G C T A G T C G A T C G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:7
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:GGTTGGAGATCATCCC
----GGGGATTCCCCC
 A C T G A T C G A G C T A C G T C A T G A T C G C G T A T A C G G C T A G A C T A G T C G C T A A G C T A G T C G A T C G A T C
A C G T A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GGTTGGAGATCATCCC
BCNGGTTCTAGANCN----
 A C G T A C G T A C G T A C T G A T C G A G C T A C G T C A T G A T C G C G T A T A C G G C T A G A C T A G T C G C T A A G C T A G T C G A T C G A T C
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:GGTTGGAGATCATCCC--
------KGCCCTTCCCCA
 A C T G A T C G A G C T A C G T C A T G A T C G C G T A T A C G G C T A G A C T A G T C G C T A A G C T A G T C G A T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GGTTGGAGATCATCCC
GGGCGATGACCAYTC-
 A C T G A T C G A G C T A C G T C A T G A T C G C G T A T A C G G C T A G A C T A G T C G C T A A G C T A G T C G A T C G A T C
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C A C G T