Information for 11-GACAGGGTTGWTG (Motif 27)

A C T G C G T A G T A C C G T A A C T G C T A G C T A G A G C T C G A T A T C G C G A T A C G T A T C G
Reverse Opposite:
A T G C C G T A C G T A A T G C C G T A C T G A A G T C A G T C A G T C A C G T A C T G C G A T A G T C
p-value:1e-9
log p-value:-2.076e+01
Information Content per bp:1.832
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets62.6 +/- 22.1bp
Average Position of motif in Background57.4 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GACAGGGTTGWTG
TTGACAGC-------
 A C G T A C G T A C T G C G T A G T A C C G T A A C T G C T A G C T A G A G C T C G A T A T C G C G A T A C G T A T C G
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GACAGGGTTGWTG
TTGACAGG-------
 A C G T A C G T A C T G C G T A G T A C C G T A A C T G C T A G C T A G A G C T C G A T A T C G C G A T A C G T A T C G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GACAGGGTTGWTG
TTGACAG--------
 A C G T A C G T A C T G C G T A G T A C C G T A A C T G C T A G C T A G A G C T C G A T A T C G C G A T A C G T A T C G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GACAGGGTTGWTG
CACAGN-------
 A C T G C G T A G T A C C G T A A C T G C T A G C T A G A G C T C G A T A T C G C G A T A C G T A T C G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GACAGGGTTGWTG
VBTGWCAGCB------
 A C G T A C G T A C G T A C T G C G T A G T A C C G T A A C T G C T A G C T A G A G C T C G A T A T C G C G A T A C G T A T C G
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GACAGGGTTGWTG-
GTCACGCTCNCTGA
 A C T G C G T A G T A C C G T A A C T G C T A G C T A G A G C T C G A T A T C G C G A T A C G T A T C G A C G T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GACAGGGTTGWTG
RHTGWCAR--------
 A C G T A C G T A C G T A C T G C G T A G T A C C G T A A C T G C T A G C T A G A G C T C G A T A T C G C G A T A C G T A T C G
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGGGTTGWTG
GGATTGACAGGTCNTT--
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T A C C G T A A C T G C T A G C T A G A G C T C G A T A T C G C G A T A C G T A T C G
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GACAGGGTTGWTG
GATATTGACAGCTGCGT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T A C C G T A A C T G C T A G C T A G A G C T C G A T A T C G C G A T A C G T A T C G
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GACAGGGTTGWTG
GGTGYTGACAGS-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T A C C G T A A C T G C T A G C T A G A G C T C G A T A T C G C G A T A C G T A T C G
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T