Information for 15-GCCTCCGTCTTGGCTC (Motif 23)

A C T G A G T C A G T C A C G T A T G C A T G C A C T G A C G T A G T C A G C T A C G T A T C G A C T G A T G C A C G T A G T C
Reverse Opposite:
C T A G C G T A T A C G A G T C A T G C G T C A C T G A A C T G G T C A A G T C A T C G A T C G C G T A A C T G A C T G A G T C
p-value:1e-9
log p-value:-2.196e+01
Information Content per bp:1.911
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.6 +/- 29.7bp
Average Position of motif in Background50.4 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCCTCCGTCTTGGCTC
GCCGCCATCTTG----
 A C T G A G T C A G T C A C G T A T G C A T G C A C T G A C G T A G T C A G C T A C G T A T C G A C T G A T G C A C G T A G T C
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCCGTCTTGGCTC
TGCCTGAGGCN------
 A C G T A C T G A G T C A G T C A C G T A T G C A T G C A C T G A C G T A G T C A G C T A C G T A T C G A C T G A T G C A C G T A G T C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCCGTCTTGGCTC
NGCCTNAGGCN------
 A C G T A C T G A G T C A G T C A C G T A T G C A T G C A C T G A C G T A G T C A G C T A C G T A T C G A C T G A T G C A C G T A G T C
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCCTCCGTCTTGGCTC
GCNGCCATCTTG----
 A C T G A G T C A G T C A C G T A T G C A T G C A C T G A C G T A G T C A G C T A C G T A T C G A C T G A T G C A C G T A G T C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCCGTCTTGGCTC
NGCCTGAGGCN------
 A C G T A C T G A G T C A G T C A C G T A T G C A T G C A C T G A C G T A G T C A G C T A C G T A T C G A C T G A T G C A C G T A G T C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GCCTCCGTCTTGGCTC-
--------NTTGGCANN
 A C T G A G T C A G T C A C G T A T G C A T G C A C T G A C G T A G T C A G C T A C G T A T C G A C T G A T G C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCCGTCTTGGCTC
ANTGCCTGAGGCAAN----
 A C G T A C G T A C G T A C T G A G T C A G T C A C G T A T G C A T G C A C T G A C G T A G T C A G C T A C G T A T C G A C T G A T G C A C G T A G T C
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.52
Offset:9
Orientation:forward strand
Alignment:GCCTCCGTCTTGGCTC
---------TTGGCA-
 A C T G A G T C A G T C A C G T A T G C A T G C A C T G A C G T A G T C A G C T A C G T A T C G A C T G A T G C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCCGTCTTGGCTC
NTNGCCTCAGGCNNN----
 A C G T A C G T A C G T A C T G A G T C A G T C A C G T A T G C A T G C A C T G A C G T A G T C A G C T A C G T A T C G A C T G A T G C A C G T A G T C
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GCCTCCGTCTTGGCTC
----CTGTCTGG----
 A C T G A G T C A G T C A C G T A T G C A T G C A C T G A C G T A G T C A G C T A C G T A T C G A C T G A T G C A C G T A G T C
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T