Information for 10-TCAGTSTGAGMRY (Motif 22)

A C G T A T G C C G T A A C T G A C G T A T C G A C G T A C T G C G T A C T A G G T A C C T A G A G C T
Reverse Opposite:
C T G A A G T C A C T G A G T C A C G T A G T C C G T A A T G C C G T A A G T C A C G T A T C G C G T A
p-value:1e-9
log p-value:-2.196e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.4 +/- 22.2bp
Average Position of motif in Background92.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TCAGTSTGAGMRY
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A C G T A T C G A C G T A C T G C G T A C T A G G T A C C T A G A G C T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCAGTSTGAGMRY
CTTTCANTATGACTV-
 A C G T A C G T A C G T A C G T A T G C C G T A A C T G A C G T A T C G A C G T A C T G C G T A C T A G G T A C C T A G A G C T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TCAGTSTGAGMRY
NAGGTCACNNTGACC--
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A C G T A T C G A C G T A C T G C G T A C T A G G T A C C T A G A G C T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCAGTSTGAGMRY
-AGGTGTGA----
 A C G T A T G C C G T A A C T G A C G T A T C G A C G T A C T G C G T A C T A G G T A C C T A G A G C T
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCAGTSTGAGMRY
-AGGTGTGA----
 A C G T A T G C C G T A A C T G A C G T A T C G A C G T A C T G C G T A C T A G G T A C C T A G A G C T
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TCAGTSTGAGMRY
TCAGTCTT-----
 A C G T A T G C C G T A A C T G A C G T A T C G A C G T A C T G C G T A C T A G G T A C C T A G A G C T
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCAGTSTGAGMRY--
NNGCGTGTGTGCNGCN
 A C G T A C G T A T G C C G T A A C T G A C G T A T C G A C G T A C T G C G T A C T A G G T A C C T A G A G C T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCAGTSTGAGMRY
-TWGTCTGV----
 A C G T A T G C C G T A A C T G A C G T A T C G A C G T A C T G C G T A C T A G G T A C C T A G A G C T
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TCAGTSTGAGMRY
-CTGTCTGG----
 A C G T A T G C C G T A A C T G A C G T A T C G A C G T A C T G C G T A C T A G G T A C C T A G A G C T
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCAGTSTGAGMRY
DCTCAGCAGG-----
 A C G T A C G T A C G T A T G C C G T A A C T G A C G T A T C G A C G T A C T G C G T A C T A G G T A C C T A G A G C T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T