Information for 1-TCTTTTTGACCCT (Motif 2)

C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C T G G C T A A G T C A G T C A G T C C G A T
Reverse Opposite:
C G T A A C T G A C T G A C T G C G A T A G T C C G T A C G T A C G T A C G T A C G T A A C T G G T C A
p-value:1e-13
log p-value:-3.133e+01
Information Content per bp:1.936
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.2 +/- 36.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarb/MA0857.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCTTTTTGACCCT-
TGACCTTTTGACCTTT
 A C G T A C G T C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C T G G C T A A G T C A G T C A G T C C G A T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Rarg/MA0859.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCTTTTTGACCCT
TTGACCTTTTGACCTT
 A C G T A C G T A C G T C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C T G G C T A A G T C A G T C A G T C C G A T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCTTTTTGACCCT-----
-NNANTTGACCCCTNNNN
 C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C T G G C T A A G T C A G T C A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TCTTTTTGACCCT
------TGACCT-
 C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C T G G C T A A G T C A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TCTTTTTGACCCT-
------TGACCYCT
 C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C T G G C T A A G T C A G T C A G T C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCTTTTTGACCCT--
WCATTTTGKCCTCYT
 C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C T G G C T A A G T C A G T C A G T C C G A T A C G T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCTTTTTGACCCT-----
-TGTCGTGACCCCTTAAT
 C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C T G G C T A A G T C A G T C A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCTTTTTGACCCT--
--CNNTTGACCTTTG
 C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C T G G C T A A G T C A G T C A G T C C G A T A C G T A C G T
A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCTTTTTGACCCT
TGACCTTTTGACCTC
 A C G T A C G T C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C T G G C T A A G T C A G T C A G T C C G A T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCTTTTTGACCCT-----
--NNNNTGACCTTTNNNN
 C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C T G G C T A A G T C A G T C A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A