Information for 11-TGCCTTTCACATGGAC (Motif 14)

C G A T T A C G A T G C G A T C C G A T A C G T A C G T A T G C T G C A T G A C G T C A A C G T C T A G A T C G G T C A A G T C
Reverse Opposite:
C T A G A C G T A T G C A G T C G T C A A C G T A C T G A C G T T A C G T G C A T G C A C G T A C T A G T A C G A G T C G C T A
p-value:1e-10
log p-value:-2.516e+01
Information Content per bp:1.660
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif54.9
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets58.2 +/- 21.4bp
Average Position of motif in Background36.6 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGCCTTTCACATGGAC
-----GTCACGTGGM-
 C G A T T A C G A T G C G A T C C G A T A C G T A C G T A T G C T G C A T G A C G T C A A C G T C T A G A T C G G T C A A G T C
A C G T A C G T A C G T A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGCCTTTCACATGGAC
---HTTTCCCASG---
 C G A T T A C G A T G C G A T C C G A T A C G T A C G T A T G C T G C A T G A C G T C A A C G T C T A G A T C G G T C A A G T C
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGCCTTTCACATGGAC
CTGTCTGTCACCT----
 A C G T C G A T T A C G A T G C G A T C C G A T A C G T A C G T A T G C T G C A T G A C G T C A A C G T C T A G A T C G G T C A A G T C
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGCCTTTCACATGGAC--
---CTTTGTTATGCAAAT
 C G A T T A C G A T G C G A T C C G A T A C G T A C G T A T G C T G C A T G A C G T C A A C G T C T A G A T C G G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

USF2/MA0526.1/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGCCTTTCACATGGAC
----GGTCACATGAC-
 C G A T T A C G A T G C G A T C C G A T A C G T A C G T A T G C T G C A T G A C G T C A A C G T C T A G A T C G G T C A A G T C
A C G T A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T

Myc/MA0147.2/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGCCTTTCACATGGAC
----AAGCACATGG--
 C G A T T A C G A T G C G A T C C G A T A C G T A C G T A T G C T G C A T G A C G T C A A C G T C T A G A T C G G T C A A G T C
A C G T A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGCCTTTCACATGGAC---
--NNTTTTACATGTANNNT
 C G A T T A C G A T G C G A T C C G A T A C G T A C G T A T G C T G C A T G A C G T C A A C G T C T A G A T C G G T C A A G T C A C G T A C G T A C G T
A C G T A C G T G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCCTTTCACATGGAC
TGTCTGDCACCT----
 C G A T T A C G A T G C G A T C C G A T A C G T A C G T A T G C T G C A T G A C G T C A A C G T C T A G A T C G G T C A A G T C
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TGCCTTTCACATGGAC
-----GTCACATGAY-
 C G A T T A C G A T G C G A T C C G A T A C G T A C G T A T G C T G C A T G A C G T C A A C G T C T A G A T C G G T C A A G T C
A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGCCTTTCACATGGAC-----
ACCGCCNTCCACGTGTANNGACA
 A C G T A C G T C G A T T A C G A T G C G A T C C G A T A C G T A C G T A T G C T G C A T G A C G T C A A C G T C T A G A T C G G T C A A G T C A C G T A C G T A C G T A C G T A C G T
C G T A G A T C G A T C C A T G T A G C G A T C G A C T C A G T T G A C G T A C C T G A A G T C T C A G G A C T A C T G A C G T G T C A C T G A G A C T T A C G C T G A G A T C C T G A