Information for 19-RKTKSAAGCATAC (Motif 42)

C T A G A C G T A C G T A C G T A T G C G T C A C G T A A C T G A G T C C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T A C T G A G T C A C G T A C G T A T C G G T C A C G T A G T C A A G T C
p-value:1e-6
log p-value:-1.420e+01
Information Content per bp:1.876
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 25.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:RKTKSAAGCATAC
----CAAGCTT--
 C T A G A C G T A C G T A C G T A T G C G T C A C G T A A C T G A G T C C G T A A C G T C G T A A G T C
A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:RKTKSAAGCATAC---
-----AAGGATATNTN
 C T A G A C G T A C G T A C G T A T G C G T C A C G T A A C T G A G T C C G T A A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:RKTKSAAGCATAC------
---CGAAGCACACAAAATA
 C T A G A C G T A C G T A C G T A T G C G T C A C G T A A C T G A G T C C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:RKTKSAAGCATAC------
---AGCGGCACACACGCAA
 C T A G A C G T A C G T A C G T A T G C G T C A C G T A A C T G A G T C C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

BHLHE23/MA0817.1/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:RKTKSAAGCATAC----
-----AAACATATGTTT
 C T A G A C G T A C G T A C G T A T G C G T C A C G T A A C T G A G T C C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

PB0198.1_Zfp128_2/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:RKTKSAAGCATAC-
NNTATANATATACN
 C T A G A C G T A C G T A C G T A T G C G T C A C G T A A C T G A G T C C G T A A C G T C G T A A G T C A C G T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:RKTKSAAGCATAC
---NGAAGC----
 C T A G A C G T A C G T A C G T A T G C G T C A C G T A A C T G A G T C C G T A A C G T C G T A A G T C
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:8
Score:0.52
Offset:7
Orientation:forward strand
Alignment:RKTKSAAGCATAC--
-------ACATTCCA
 C T A G A C G T A C G T A C G T A T G C G T C A C G T A A C T G A G T C C G T A A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:RKTKSAAGCATAC--
-----ATGMATATDC
 C T A G A C G T A C G T A C G T A T G C G T C A C G T A A C T G A G T C C G T A A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

BHLHE22/MA0818.1/Jaspar

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:RKTKSAAGCATAC---
------ANCATATGGT
 C T A G A C G T A C G T A C G T A T G C G T C A C G T A A C T G A G T C C G T A A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T