Information for 3-CDGGGCAACABGTCTV (Motif 4)

T A G C C A G T A C T G C T A G A T C G G T A C G T C A C T G A A G T C C G T A A C T G C T A G A C G T A G T C G A C T T A G C
Reverse Opposite:
A C T G C T G A A C T G C G T A A G T C T G A C A C G T A C T G A G C T A C G T A C T G A T G C A G T C A G T C G T C A A T C G
p-value:1e-13
log p-value:-3.140e+01
Information Content per bp:1.743
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 27.3bp
Average Position of motif in Background61.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CDGGGCAACABGTCTV
--ATGCAACAGGTGG-
 T A G C C A G T A C T G C T A G A T C G G T A C G T C A C T G A A G T C C G T A A C T G C T A G A C G T A G T C G A C T T A G C
A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CDGGGCAACABGTCTV-
--GAGCAACAGGTGGTT
 T A G C C A G T A C T G C T A G A T C G G T A C G T C A C T G A A G T C C G T A A C T G C T A G A C G T A G T C G A C T T A G C A C G T
A C G T A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:CDGGGCAACABGTCTV
-------GCACGTAY-
 T A G C C A G T A C T G C T A G A T C G G T A C G T C A C T G A A G T C C G T A A C T G C T A G A C G T A G T C G A C T T A G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CDGGGCAACABGTCTV
GAGGTCAAAAGGTCA-
 T A G C C A G T A C T G C T A G A T C G G T A C G T C A C T G A A G T C C G T A A C T G C T A G A C G T A G T C G A C T T A G C
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CDGGGCAACABGTCTV
------AACAGGTGT-
 T A G C C A G T A C T G C T A G A T C G G T A C G T C A C T G A A G T C C G T A A C T G C T A G A C G T A G T C G A C T T A G C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CDGGGCAACABGTCTV
-------GCACGTNC-
 T A G C C A G T A C T G C T A G A T C G G T A C G T C A C T G A A G T C C G T A A C T G C T A G A C G T A G T C G A C T T A G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CDGGGCAACABGTCTV-
-NNGGCGACACCTCNNN
 T A G C C A G T A C T G C T A G A T C G G T A C G T C A C T G A A G T C C G T A A C T G C T A G A C G T A G T C G A C T T A G C A C G T
A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

CLOCK/MA0819.1/Jaspar

Match Rank:8
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CDGGGCAACABGTCTV
------AACACGTGTT
 T A G C C A G T A C T G C T A G A T C G G T A C G T C A C T G A A G T C C G T A A C T G C T A G A C G T A G T C G A C T T A G C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CDGGGCAACABGTCTV-
-------GCACGTACCC
 T A G C C A G T A C T G C T A G A T C G G T A C G T C A C T G A A G T C C G T A A C T G C T A G A C G T A G T C G A C T T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

Rarg/MA0859.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CDGGGCAACABGTCTV
AAGGTCAAAAGGTCAA
 T A G C C A G T A C T G C T A G A T C G G T A C G T C A C T G A A G T C C G T A A C T G C T A G A C G T A G T C G A C T T A G C
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A