Information for 6-CAAAGCGCCGTTC (Motif 19)

T A G C G T C A C T G A C T G A T C A G G T A C T A C G G A T C A G T C A C T G A G C T C G A T G A T C
Reverse Opposite:
C A T G C G T A T C G A T G A C T C A G C T A G A T G C C A T G A G T C A G C T A G C T A C G T A C T G
p-value:1e-9
log p-value:-2.253e+01
Information Content per bp:1.695
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif22.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets45.4 +/- 24.4bp
Average Position of motif in Background61.8 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAAAGCGCCGTTC
ACAAAGGNBCCT--
 A C G T T A G C G T C A C T G A C T G A T C A G G T A C T A C G G A T C A G T C A C T G A G C T C G A T G A T C
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T

MSC/MA0665.1/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAAAGCGCCGTTC
--AACAGCTGTT-
 T A G C G T C A C T G A C T G A T C A G G T A C T A C G G A T C A G T C A C T G A G C T C G A T G A T C
A C G T A C G T C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CAAAGCGCCGTTC
ACATCAAAGG-------
 A C G T A C G T A C G T A C G T T A G C G T C A C T G A C T G A T C A G G T A C T A C G G A T C A G T C A C T G A G C T C G A T G A T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MYF6/MA0667.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CAAAGCGCCGTTC
--AACAGCTGTT-
 T A G C G T C A C T G A C T G A T C A G G T A C T A C G G A T C A G T C A C T G A G C T C G A T G A T C
A C G T A C G T T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CAAAGCGCCGTTC
AGAGTCCAAAGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T C A C T G A C T G A T C A G G T A C T A C G G A T C A G T C A C T G A G C T C G A T G A T C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------CAAAGCGCCGTTC
AAAGATCAAAGGAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T C A C T G A C T G A T C A G G T A C T A C G G A T C A G T C A C T G A G C T C G A T G A T C
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T A C G T A C G T

Tcf21/MA0832.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAAAGCGCCGTTC-
GCAACAGCTGTTGT
 T A G C G T C A C T G A C T G A T C A G G T A C T A C G G A T C A G T C A C T G A G C T C G A T G A T C A C G T
T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAAAGCGCCGTTC---
--NNGCACCTTTCTCC
 T A G C G T C A C T G A C T G A T C A G G T A C T A C G G A T C A G T C A C T G A G C T C G A T G A T C A C G T A C G T A C G T
A C G T A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CAAAGCGCCGTTC--
-----TKCTGTTCCA
 T A G C G T C A C T G A C T G A T C A G G T A C T A C G G A T C A G T C A C T G A G C T C G A T G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CAAAGCGCCGTTC
ACAAAG--------
 A C G T T A G C G T C A C T G A C T G A T C A G G T A C T A C G G A T C A G T C A C T G A G C T C G A T G A T C
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T