Information for 9-GCCGCCGACA (Motif 20)

A C T G A G T C A G T C A C T G A G T C A G T C A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T C T A G A C G T A G T C A C T G A C T G A G T C A C T G A C T G A G T C
p-value:1e-6
log p-value:-1.427e+01
Information Content per bp:1.958
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif15.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.8 +/- 27.1bp
Average Position of motif in Background43.1 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCCGCCGACA--
ATTGCCTCAGGCAAT
 A C G T A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G T C A C T G C G T A A G T C C G T A A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCGACA--
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G T C A C T G C G T A A G T C C G T A A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCGCCGACA--
YCCGCCCACGCN
 A C T G A G T C A G T C A C T G A G T C A G T C A C T G C G T A A G T C C G T A A C G T A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GCCGCCGACA-
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G T C A C T G C G T A A G T C C G T A A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCCGCCGACA
TTTCCCGCCMAV-
 A C G T A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G T C A C T G C G T A A G T C C G T A
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCGCCGACA
RGGGCACTAACY
 A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G T C A C T G C G T A A G T C C G T A
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCCGACA
GCTCCGCCCMCY
 A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G T C A C T G C G T A A G T C C G T A
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

E2F1/MA0024.3/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCCGCCGACA
TTTGGCGCCAAA-
 A C G T A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G T C A C T G C G T A A G T C C G T A
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCGCCGACA
AGCGCGCC----
 A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G T C A C T G C G T A A G T C C G T A
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCCGCCGACA--
-ACGCCCACGCA
 A C T G A G T C A G T C A C T G A G T C A G T C A C T G C G T A A G T C C G T A A C G T A C G T
A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A