Information for 1-CGGCTTTYTA (Motif 2)

T G A C A T C G A C T G A T G C G A C T A G C T A G C T A G T C G C A T C T G A
Reverse Opposite:
G A C T C G T A C T A G C T G A C T G A C T G A A T C G A G T C A T G C A C T G
p-value:1e-15
log p-value:-3.616e+01
Information Content per bp:1.653
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.40%
Number of Background Sequences with motif426.1
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets42.0 +/- 25.3bp
Average Position of motif in Background52.1 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CGGCTTTYTA
-NGCTN----
 T G A C A T C G A C T G A T G C G A C T A G C T A G C T A G T C G C A T C T G A
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGGCTTTYTA
--GCTTCC--
 T G A C A T C G A C T G A T G C G A C T A G C T A G C T A G T C G C A T C T G A
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGGCTTTYTA-
-NSCACTYVAV
 T G A C A T C G A C T G A T G C G A C T A G C T A G C T A G T C G C A T C T G A A C G T
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

SPI1/MA0080.4/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCTTTYTA
TACTTCCGCTTTTT-
 A C G T A C G T A C G T A C G T A C G T T G A C A T C G A C T G A T G C G A C T A G C T A G C T A G T C G C A T C T G A
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGGCTTTYTA
CNAGGCCT----
 A C G T A C G T T G A C A T C G A C T G A T G C G A C T A G C T A G C T A G T C G C A T C T G A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGGCTTTYTA
-GGCGCGCT-
 T G A C A T C G A C T G A T G C G A C T A G C T A G C T A G T C G C A T C T G A
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGGCTTTYTA
CAGCTGTT--
 T G A C A T C G A C T G A T G C G A C T A G C T A G C T A G T C G C A T C T G A
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGGCTTTYTA--------
-TGCTTTCTAGGAATTCA
 T G A C A T C G A C T G A T G C G A C T A G C T A G C T A G T C G C A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGGCTTTYTA
--GCTCCG--
 T G A C A T C G A C T G A T G C G A C T A G C T A G C T A G T C G C A T C T G A
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGGCTTTYTA-----
-NGCTTTCTAGGAAN
 T G A C A T C G A C T G A T G C G A C T A G C T A G C T A G T C G C A T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A