Information for 2-AAACCCTCGG (Motif 9)

T G C A C T G A G T C A A G T C G T A C G T A C A C G T A G T C C T A G A T C G
Reverse Opposite:
A T G C G A T C A C T G T G C A A C T G A C T G A C T G C A G T A G C T A C G T
p-value:1e-9
log p-value:-2.295e+01
Information Content per bp:1.836
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif35.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets62.0 +/- 20.9bp
Average Position of motif in Background54.9 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf423/MA0116.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAACCCTCGG----
GCACCCCTGGGTGCC
 A C G T T G C A C T G A G T C A A G T C G T A C G T A C A C G T A G T C C T A G A T C G A C G T A C G T A C G T A C G T
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAACCCTCGG
TAATCCCN---
 A C G T T G C A C T G A G T C A A G T C G T A C G T A C A C G T A G T C C T A G A T C G
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAACCCTCGG----
NNAATTCTCGNTNAN
 A C G T T G C A C T G A G T C A A G T C G T A C G T A C A C G T A G T C C T A G A T C G A C G T A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PH0137.1_Pitx1/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AAACCCTCGG-
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A G T C A A G T C G T A C G T A C A C G T A G T C C T A G A T C G A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PH0123.1_Obox3/Jaspar

Match Rank:5
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------AAACCCTCGG-
ATAGTTAATCCCCCNNA
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A G T C A A G T C G T A C G T A C A C G T A G T C C T A G A T C G A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAACCCTCGG----
ACCACTCTCGGTCAC
 A C G T T G C A C T G A G T C A A G T C G T A C G T A C A C G T A G T C C T A G A T C G A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

EBF1/MA0154.3/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAACCCTCGG----
ATTCCCAAGGGAAT
 T G C A C T G A G T C A A G T C G T A C G T A C A C G T A G T C C T A G A T C G A C G T A C G T A C G T A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AAACCCTCGG
CTTAATCCC----
 A C G T A C G T A C G T T G C A C T G A G T C A A G T C G T A C G T A C A C G T A G T C C T A G A T C G
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AAACCCTCGG
NYTAATCCYB---
 A C G T A C G T A C G T T G C A C T G A G T C A A G T C G T A C G T A C A C G T A G T C C T A G A T C G
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAACCCTCGG--
ATGCCCTGAGGC
 T G C A C T G A G T C A A G T C G T A C G T A C A C G T A G T C C T A G A T C G A C G T A C G T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C